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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI

Inferred distinct locusB in Crop

locusBlocations
KXG21921

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G13530.1 KXG21921 AT5G13530.1 21343429
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038106_P002 Maize cytosol 94.59 93.5
TraesCS1D01G244900.2 Wheat plastid 85.92 87.59
TraesCS1A01G245000.3 Wheat cytosol 87.83 87.56
TraesCS1B01G256200.2 Wheat cytosol 87.71 87.49
Zm00001d010470_P005 Maize cytosol, nucleus, plasma membrane 93.67 77.01
HORVU7Hr1G076430.1 Barley plastid 9.34 69.41
GSMUA_Achr9P16290_001 Banana endoplasmic reticulum, golgi 29.93 68.21
VIT_13s0084g00680.t01 Wine grape cytosol 67.85 67.69
KRH20701 Soybean cytosol, plasma membrane 58.39 66.85
KRH30086 Soybean nucleus 67.24 66.83
Solyc01g096490.2.1 Tomato cytosol, nucleus 66.81 66.56
Bra006205.1-P Field mustard cytosol 64.97 65.73
AT5G13530.1 Thale cress cytosol 65.27 65.35
CDX70509 Canola cytosol 64.9 65.1
KRH62822 Soybean mitochondrion 26.06 59.22
HORVU7Hr1G076440.1 Barley plastid 9.83 57.35
Os05t0392050-00 Rice nucleus, plasma membrane 12.6 52.16
KXG20460 Sorghum cytosol 9.1 23.49
Protein Annotations
Gene3D:1.10.510.10Gene3D:1.25.40.20MapMan:11.1.2.5Gene3D:3.30.40.10UniProt:A0A1B6P8P3InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0046872
InterPro:IPR000719InterPro:IPR001841InterPro:IPR002110InterPro:IPR013083InterPro:IPR020683InterPro:IPR036770
EnsemblPlants:KXG21921ProteinID:KXG21921ProteinID:KXG21921.1InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF00097
PFAM:PF12796PRINTS:PR01415ScanProsite:PS00518PFscan:PS50011PFscan:PS50088PFscan:PS50089
PFscan:PS50297PANTHER:PTHR22967PANTHER:PTHR22967:SF70InterPro:Prot_kinase_domSMART:SM00184SMART:SM00248
EnsemblPlantsGene:SORBI_3009G126300SUPFAM:SSF48403SUPFAM:SSF56112SUPFAM:SSF57850UniParc:UPI00081AE7F2InterPro:Znf_C3HC4_RING-type
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDInterPro:Znf_RING_CSSEG:seg::
Description
hypothetical protein
Coordinates
chr9:-:48006607..48021494
Molecular Weight (calculated)
177986.0 Da
IEP (calculated)
6.289
GRAVY (calculated)
-0.197
Length
1627 amino acids
Sequence
(BLAST)
0001: MRVPCCSLCN VRYDEEERTP LLLHCGHGFC RACLSRMLAA APGATLACPR CRHPTAVGNS VSALRKNFPI LSLLSASPSS PSFLHSDSGS SSDGSEDEDD
0101: FFARPSRRPA PAPAAAPPGC SSFDLVSHPD LKLARRIGSG PPGPAGQEVW AGMLSRGGGG GGVKRCKHQV AVKRVPLAAG DGLEVVQEEV ERLRRASTWC
0201: RNVCTFHGAV RVGGHLCFVM DRYVGSVQAE MRQNGGRLTL EQILRYGADI ARGVAELHAA GIVCMSIKPS NILLDAHGHA VVSDYGLSAI LKNLTSRRVP
0301: DDSSAGIDAT LLSPNYTAPE AWGPLKKSLN MFWDSANGIS PESDAWSFGC TLVEMCTGAV PWAGLSAEEI CKSVVKEKKP PPQYSRVVGV GLPGELWKMI
0401: GECLQFRASR RPSFQDMLKT FLRHLLDIPR SPPASPENDF TNENLPNGME PPTTSILEMV HDNPNALHHL VCEGDAAGVR DLLAKAASER NGSLIRSLLE
0501: AQNTDGLTAL HLACRRGSGE LVEAIVAYQE NVDILDKDED PPIVFALAAG SPRCVRALVG RSASINSRLR EGLGPTLAHV CAHHGQPECM QELLMAGADP
0601: NAVDGEGESV LHIAVARRYT DCAIVILENG GCRSMGISNS QHKTPLHLCI ETWNTAVVRR WVEIASLEDI AEAIDVPSPV GTALCMAAAL KKEHEKEGRE
0701: LVRILLAAGA DPTAQDDPHC RTALHTAAMI DDVELVKIIL EAGVDVNIRN AQNTTPLHVA LNRGANSCVG LLLAAGANCN IQDDDGDNAF HIAADAAKMI
0801: RENLTWIAQM LLQPSPAVDV RNHRGWTLRD FLERLPREWI YEELMETLED KGVHLSPTMY EVADWVKFRR TVTSPAFGWQ GAGPRSIGFV QSVVDNDHLA
0901: VSFCTGEAHV LTSEVIKVIP LNRGQHVQLK PDVLEPRFGW RGQSRDSIGT VLCVDDDGIL RVGFPGASRG WRADPAEIER VEEYKVGNWV RIRPSLTVAV
1001: HGMESITPGS VGIVYSIRPD SSLLLGLCYL SHPWLCEPEE VEHVDPFKIG DQVCVKRSVA EPRYAWGGET HHSVGKIIDI ESDGLLIIDI PNRAAPWQAD
1101: PSDMEKIENF KVGDWIRVKA TVPSPKYGWE DVTRNSIGIV HSLQDDGDVG VAFCFRSKLF LCSVADVEKA QPFEVGEKVH VSPSIPEPRL GWLNETAATI
1201: GAISRIDMDG TLNIKVSGRK SLWKVAPGDA ERLSAFEVGD WVRPKPSIGS RPTYDWNSVG RISIAVVHSI QDSGYLELAG CFRNGKWLTH NTDIEKVQTL
1301: KIGQHVRFRA GISEPRWGWR DANPDSRGII AGVHADGEVR VAFFGVPGLW RGDPADLEVE NIFEVGEWVR LRNNVEQWRS LKPGSIGVVH GVGYQGDAWD
1401: GTIHVAFCGE QERWVGPSSQ LEGVSKFVVG QRVRIRGCIR HPRFGWSNHS HSSIGTISSI DADGKLRIHT PAGARAWLID PAEVEKVEEE EEVCVGDWVK
1501: VKDSVATPVY QWGDVNHNSI GVVHRADDGE LWIAFCFCER LWLCKAWEVE KVRPFRQGDK VRIRPGLVSP RWGWGMETYA SKGEVVGVDA NGKLRIKFRW
1601: RDRLWIGDPA DIVLDDAHLL TEASNGF
Best Arabidopsis Sequence Match ( AT5G13530.1 )
(BLAST)
0001: MVGRVKVPCC SVCHTRYNED ERVPLLLQCG HGFCKDCLSK MFSTSSDTTL TCPRCRHVSV VGNSVQGLRK NYAMLALIHA ASGGANFDCD YTDDEDDDDE
0101: EDGSDEDGAR AARGFHASSS INSLCGPVIE VGAHPEMKLV RQIGEESSSG GFGGVEMWDA TVAGGGGRCK HRVAVKKMTL TEDMDVEWMQ GQLESLRRAS
0201: MWCRNVCTFH GVVKMDGSLC LLMDRCFGSV QSEMQRNEGR LTLEQILRYG ADVARGVAEL HAAGVICMNI KPSNLLLDAS GNAVVSDYGL APILKKPTCQ
0301: KTRPEFDSSK VTLYTDCVTL SPHYTAPEAW GPVKKLFWED ASGVSPESDA WSFGCTLVEM CTGSTPWDGL SREEIFQAVV KARKVPPQYE RIVGVGIPRE
0401: LWKMIGECLQ FKPSKRPTFN AMLATFLRHL QEIPRSPSAS PDNGIAKICE VNIVQAPRAT NIGVFQDNPN NLHRVVLEGD FEGVRNILAK AAAGGGGSSV
0501: RSLLEAQNAD GQSALHLACR RGSAELVEAI LEYGEANVDI VDKDGDPPLV FALAAGSPQC VHVLIKKGAN VRSRLREGSG PSVAHVCSYH GQPDCMRELL
0601: VAGADPNAVD DEGETVLHRA VAKKYTDCAI VILENGGSRS MTVSNAKCLT PLHMCVATWN VAVIKRWVEV SSPEEISQAI NIPSPVGTAL CMAASIRKDH
0701: EKEGRELVQI LLAAGADPTA QDAQHGRTAL HTAAMANNVE LVRVILDAGV NANIRNVHNT IPLHMALARG ANSCVSLLLE SGSDCNIQDD EGDNAFHIAA
0801: DAAKMIRENL DWLIVMLRSP DAAVDVRNHS GKTVRDFLEA LPREWISEDL MEALLKRGVH LSPTIYEVGD WVKFKRGITT PLHGWQGAKP KSVGFVQTIL
0901: EKEDMIIAFC SGEARVLANE VVKLIPLDRG QHVRLRADVK EPRFGWRGQS RDSVGTVLCV DEDGILRVGF PGASRGWKAD PAEMERVEEF KVGDWVRIRQ
1001: NLTSAKHGFG SVVPGSMGIV YCVRPDSSLL VELSYLPNPW HCEPEEVEPV APFRIGDRVC VKRSVAEPRY AWGGETHHSV GKISEIENDG LLIIEIPNRP
1101: IPWQADPSDM EKIDDFKVGD WVRVKASVSS PKYGWEDITR NSIGVMHSLD EDGDVGIAFC FRSKPFSCSV TDVEKVTPFH VGQEIHMTPS ITQPRLGWSN
1201: ETPATIGKVM RIDMDGTLSA QVTGRQTLWR VSPGDAELLS GFEVGDWVRS KPSLGNRPSY DWSNVGRESI AVVHSIQETG YLELACCFRK GRWSTHYTDL
1301: EKIPALKVGQ FVHFQKGITE PRWGWRAAKP DSRGIITTVH ADGEVRVAFF GLPGLWRGDP ADLEVEPMFE VGEWVRLREG VSCWKSVGPG SVGVVHGVGY
1401: EGDEWDGTTS VSFCGEQERW AGPTSHLEKA KKLVVGQKTR VKLAVKQPRF GWSGHSHGSV GTISAIDADG KLRIYTPAGS KTWMLDPSEV ETIEEEELKI
1501: GDWVRVKASI TTPTYQWGEV NPSSTGVVHR MEDGDLCVSF CFLDRLWLCK AGELERIRPF RIGDRVKIKD GLVTPRWGWG METHASKGHV VGVDANGKLR
1601: IKFLWREGRP WIGDPADIVL DETSG
Arabidopsis Description
KEGE3 ubiquitin-protein ligase KEG [Source:UniProtKB/Swiss-Prot;Acc:Q9FY48]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.