Factsheet for VIT_04s0008g05600.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
vacuole 2
plasma membrane 4
nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	vacuole
Plant-mPloc:	cytosol, nucleus, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011330.1-P	Field mustard	mitochondrion	50.53	65.34
CDX75229	Canola	cytosol	52.4	64.11
CDX68827	Canola	cytosol	52.27	63.95
AT4G32250.1	Thale cress	cytosol	52.0	63.83
KRH05180	Soybean	cytosol	26.13	61.44
Bra040070.1-P	Field mustard	cytosol	47.07	60.97
GSMUA_Achr8P25200_001	Banana	cytosol	45.87	60.78
KRH61753	Soybean	plasma membrane	49.87	60.13
KRH52418	Soybean	cytosol, peroxisome, plasma membrane	49.33	59.29
CDY61393	Canola	cytosol	35.07	59.23
CDY53702	Canola	cytosol	35.73	59.03
Os06t0639500-01	Rice	plastid	47.73	56.83
Bra040071.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.07	56.7
KXG20460	Sorghum	cytosol	47.6	56.67
HORVU7Hr1G116190.2	Barley	cytosol	47.6	56.58
TraesCS7D01G512200.1	Wheat	cytosol, peroxisome, vacuole	47.47	56.24
CDY53700	Canola	cytosol, peroxisome, plasma membrane	48.53	56.09
Zm00001d046616_P001	Maize	cytosol, nucleus, peroxisome	46.8	55.71
TraesCS7A01G523000.2	Wheat	cytosol	47.87	55.4
TraesCS7B01G440000.2	Wheat	plasma membrane	47.87	55.15
GSMUA_AchrUn_...	Banana	cytosol	46.13	54.66
KRH15865	Soybean	plasma membrane	27.47	52.82
KRH05181	Soybean	cytosol	23.07	51.18
VIT_09s0002g07110.t01	Wine grape	plastid	55.73	42.35
VIT_13s0084g00680.t01	Wine grape	cytosol	20.0	9.2

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100268069	wikigene:100268069	MapMan:18.4.1.31.2	MapMan:23.1.2.6	Gene3D:3.30.200.20
EMBL:AM473965	ProteinID:CAN70648	ProteinID:CAN70648.1	ProteinID:CBI21056	ProteinID:CBI21056.3	UniProt:D7SUV7
EMBL:FN595231	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009704	GO:GO:0009791	GO:GO:0009941
GO:GO:0009987	GO:GO:0010006	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0031359	GO:GO:1904216	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100268069
wikigene:LOC100268069	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR22967	PANTHER:PTHR22967:SF83	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI0001BE1A65	ArrayExpress:VIT_04s0008g05600	EnsemblPlantsGene:VIT_04s0008g05600
EnsemblPlants:VIT_04s0008g05600.t01	RefSeq:XP_002282747	RefSeq:XP_002282747.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:5078785..5087921

Molecular Weight (calculated)

83858.7 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.049

Length

750 amino acids

Sequence
(BLAST)

001: MQKNTFESLI WNISNKIFND MDIISIQLHL HLIKLRLRFW ADIYRRSGPP SQIISNIIIL LCRIVNKAVC LFFVFLLIFL RLKTFDSQSA LTAFFFTFNS
101: SKSSTISTSA VGMAGKAAAT QSAAAFEFEL FEGDPDHLRT VVATPNLISP WIDPATLKLR HRIGRGPFGD VWLATQHLFA EDYDEYHEVA IKMLHPIKED
201: LMKVVLDKLE NLFSKCQGLK GVCWLHGISV ISGKICIIMK FYEGSLGDKM AHLKGGKLSL RDILRYGIDL AQAILELHSK EILVLNLKPY NFLLDQNDEA
301: ILGDLGIPYL LLQIPLPSSD IARRLGTPNY MAPEQWQPEV RGPLSLETDS WGFGCSIVEM LTGVQPWCGK SVEEVHDSVV RKQEKPFIPS GLPPAVERVI
401: IGCFAYDFRS RPSMKNILEA FKSSENAVYS DGGWTGLGSR TITDNFIVNG YSEWFLSKEN FLVGDLVRSR KPPHSCKPEN MDVPGGTVVG LERDSDQDGY
501: VLVRVLGIHD PLRVHKYTLE RVTSGLAAGD WVRLETEDRR NSRVGILHSI SRDGSVDVGF IGMETLWKGS CTNLQMAESY CKGQFVRLKA NVLSPRFEWP
601: RKRGGAWATG RIWQVLPNGC LVVNFPGRLP IGDECSSFLA DPAEVELVSF NTSPGLVKKY QHLEDFHWAV RPLLIALGLF SAMKFGIFVG KKIGIGRSKE
701: KRGQSTMTQN ESQRLDNQTA GNAAWLPQTV AVSSEKVLAQ VMAGKFLPKS

Best Arabidopsis Sequence Match ( AT4G32250.3 )
(BLAST)

001: MASKIIAGKP DDTEYEIIEG ESESALAAGT SPWMNSSTLK LRHRIGRGPF GDVWLATHHQ STEDYDEHHE VAIKMLYPIK EDQRRVVVDK FEDLFSKCQG
101: LENVCLLRGV SSINGKICVV MKFYEGSLGD KMARLKGGKL SLPDVLRYGV DLATGILELH SKGFLILNLK PSNFLLSDND KAILGDVGIP YLLLSIPLPS
201: SDMTERLGTP NYMAPEQWQP DVRGPMSFET DSWGFGCSIV EMLTGVQPWS GRSADEIYDL VVRKQEKLSI PSSIPPPLEN LLRGCFMYDL RSRPSMTDIL
301: LVLKSLQNSE EEQVRRGIDS REIRKSSATL GYTEWFLSKD HLQVRDTVRS RKPANSCKHE NMDVPEGMVV GLERDSTDPD GFVLVKVHGV HDPLRVHVSV
401: LERVTNGLAS GDWVRLKVRK DKRHSPVGVL HSIDREGNVA VGFIGLPTLW KGTSSQLQMA KVYSVGQFVK LKANVVIPRF KWMRKGRGIW ATGRISQVLP
501: NGCLEVDFPG MLPFGEEHGS YLADPAEVEI VNFNTCQGAV EKYQHLEDFH WAVRPLLIAM GLLTAMKLGI CVRKKIGRSK DGKQRDGSTG QGDCKIPDGK
601: GSDKSKWLVF F

Arabidopsis Description

AT4g32250/F10M6_110 [Source:UniProtKB/TrEMBL;Acc:Q8RWX4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.