Factsheet for VIT_09s0002g07110.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058600	Potato	cytosol	40.53	64.41
GSMUA_Achr8P25200_001	Banana	cytosol	35.26	61.48
Os06t0639500-01	Rice	plastid	37.18	58.25
KXG20460	Sorghum	cytosol	37.08	58.1
TraesCS7D01G512200.1	Wheat	cytosol, peroxisome, vacuole	37.18	57.98
HORVU7Hr1G116190.2	Barley	cytosol	36.68	57.37
Zm00001d046616_P001	Maize	cytosol, nucleus, peroxisome	36.47	57.14
TraesCS7A01G523000.2	Wheat	cytosol	37.49	57.1
TraesCS7B01G440000.2	Wheat	plasma membrane	37.59	56.99
GSMUA_AchrUn_...	Banana	cytosol	35.97	56.08
VIT_04s0008g05600.t01	Wine grape	plasma membrane	42.35	55.73
Solyc01g005030.2.1	Tomato	cytosol, peroxisome, plasma membrane	41.54	35.59
VIT_13s0084g00680.t01	Wine grape	cytosol	15.81	9.56

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100247324	wikigene:100247324	EntrezGene:100268161	wikigene:100268161	MapMan:18.4.1.31.2
MapMan:23.1.2.6	Gene3D:3.30.200.20	EMBL:AM431896	ProteinID:CAN82448	ProteinID:CAN82448.1	ProteinID:CCB59618
ProteinID:CCB59618.1	UniProt:F6HXE8	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0043565	InterPro:IPR000719	InterPro:IPR025422
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100247324	wikigene:LOC100247324	EntrezGene:LOC100268161	wikigene:LOC100268161	PFAM:PF07714
PFAM:PF14144	ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51806	PANTHER:PTHR22967	PANTHER:PTHR22967:SF60
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TGA_domain	UniParc:UPI000210A4EC
ArrayExpress:VIT_09s0002g07110	EnsemblPlantsGene:VIT_09s0002g07110	EnsemblPlants:VIT_09s0002g07110.t01	RefSeq:XP_002265172	RefSeq:XP_002265172.1	RefSeq:XP_002265218
RefSeq:XP_002265218.2	RefSeq:XP_003632763	RefSeq:XP_003632763.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:7042517..7054897

Molecular Weight (calculated)

110872.0 Da

IEP (calculated)

7.679

GRAVY (calculated)

-0.250

Length

987 amino acids

Sequence
(BLAST)

001: MPPLFLCPLT GLSPSFWHFN QRHHSRIVFI VDIKARSDRL RENRKGNAYA SRWVLRTPSY SRPTATLTAV LEKMAEKIGA APPPASFEYE LFEGDPDHLR
101: TVAATSTQLS PWIDPASLKL KHRIGRGLFG DVWLATHHQS ADDYDEYHEV AVKMLHTIRE DHMQMFLDKF AGIFLKCRQL KGVCWLHGIS IKTGKVCIAM
201: KFYEGSVGDR MAHLKGGKLP LSDVLRYGIE LAKGIMELHS TGVLVLNLKP SNFLLNEHDQ VVLGDMGIPY LLLGIPLPNP DMVLRLGTPN YMAPEQWEPE
301: VRGPISCETD TWGFGCSIVE MLTGVQPWCG RSIEEIYQSV VIKQEKPHIP SGLPPEVENV LNGCFEYDLR NRPLMVDILQ AFESSQNAVY SDGGWIGLES
401: RTCTERSNSR GYTSWFLSKD SLHVGDIVRS RKPLNACKPQ IMDVPEGTVV GFDGDNDRDG FVLVKIRGKH NPLRVHVSTL ERVTSGLVVT DWVRLKEPNR
501: KHSTVGILHS VQRDGSVAVG FLGLETLWRG HSSELQMAET YYVGQFVRLK TNVFTPRFDW PRKKGGAWVT GRIAQVLPNG CLVVRFPGRF VFGVESNSFL
601: ADPAEVELVS FDKCHGVVEK YHHIEDFHWA VRPLVIAFGV FTTLKLGVFV GGNVCVRMRK SPRNLTPNDG QCQDGQAGGN PAWIPPTVAN ILFREGPPTA
701: TARKYIHEDD GNEEEEESKE KSVAGEETEV GEFDDIIESV QYKNLRKGET TKQGDDLSLE KHGLWLQEQK SRVARLQKHL KSRWTLEDLI QQHLHMYHAH
801: FNRALVSARL QDVAQLLMPQ WAPPHELASL AWLGDWRPSA ILGLIWARAR TSPSLSGSDP AIQRLLPQLI HELRIEETVV EEEMAEIQAT CVLHLPFAPM
901: NHRTGGAALR CIQSEFKKIH QVIVKAQSLR FKALEMVVNN VLSQTDAAEF LVAFAGIQKS IHQFAAHQRL RKGQLSVCVK AVGNSQS

Best Arabidopsis Sequence Match ( AT4G32250.3 )
(BLAST)

001: MASKIIAGKP DDTEYEIIEG ESESALAAGT SPWMNSSTLK LRHRIGRGPF GDVWLATHHQ STEDYDEHHE VAIKMLYPIK EDQRRVVVDK FEDLFSKCQG
101: LENVCLLRGV SSINGKICVV MKFYEGSLGD KMARLKGGKL SLPDVLRYGV DLATGILELH SKGFLILNLK PSNFLLSDND KAILGDVGIP YLLLSIPLPS
201: SDMTERLGTP NYMAPEQWQP DVRGPMSFET DSWGFGCSIV EMLTGVQPWS GRSADEIYDL VVRKQEKLSI PSSIPPPLEN LLRGCFMYDL RSRPSMTDIL
301: LVLKSLQNSE EEQVRRGIDS REIRKSSATL GYTEWFLSKD HLQVRDTVRS RKPANSCKHE NMDVPEGMVV GLERDSTDPD GFVLVKVHGV HDPLRVHVSV
401: LERVTNGLAS GDWVRLKVRK DKRHSPVGVL HSIDREGNVA VGFIGLPTLW KGTSSQLQMA KVYSVGQFVK LKANVVIPRF KWMRKGRGIW ATGRISQVLP
501: NGCLEVDFPG MLPFGEEHGS YLADPAEVEI VNFNTCQGAV EKYQHLEDFH WAVRPLLIAM GLLTAMKLGI CVRKKIGRSK DGKQRDGSTG QGDCKIPDGK
601: GSDKSKWLVF F

Arabidopsis Description

AT4g32250/F10M6_110 [Source:UniProtKB/TrEMBL;Acc:Q8RWX4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.