Factsheet for GSMUA_AchrUn_randomP09840_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P25200_001	Banana	cytosol	69.67	77.92
KXG20460	Sorghum	cytosol	62.72	63.02
Os06t0639500-01	Rice	plastid	61.45	61.75
HORVU7Hr1G116190.2	Barley	cytosol	61.14	61.33
Zm00001d046616_P001	Maize	cytosol, nucleus, peroxisome	60.82	61.11
TraesCS7D01G512200.1	Wheat	cytosol, peroxisome, vacuole	60.98	60.98
TraesCS7A01G523000.2	Wheat	cytosol	61.61	60.19
TraesCS7B01G440000.2	Wheat	plasma membrane	60.35	58.68
Bra011330.1-P	Field mustard	mitochondrion	52.29	57.07
AT4G32250.1	Thale cress	cytosol	54.82	56.79
Bra040070.1-P	Field mustard	cytosol	51.66	56.48
CDX75229	Canola	cytosol	54.34	56.12
CDX68827	Canola	cytosol	54.34	56.12
KRH05180	Soybean	cytosol	28.12	55.8
CDY61393	Canola	cytosol	38.86	55.41
KRH52418	Soybean	cytosol, peroxisome, plasma membrane	53.55	54.33
CDY53702	Canola	cytosol	38.86	54.19
KRH61753	Soybean	plasma membrane	53.08	54.02
Bra040071.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.92	51.62
KRH15865	Soybean	plasma membrane	31.44	51.03
CDY53700	Canola	cytosol, peroxisome, plasma membrane	52.13	50.85
PGSC0003DMT400058600	Potato	cytosol	49.76	50.72
KRH05181	Soybean	cytosol	24.8	46.45
VIT_04s0008g05600.t01	Wine grape	plasma membrane	54.66	46.13
VIT_09s0002g07110.t01	Wine grape	plastid	56.08	35.97
Solyc01g005030.2.1	Tomato	cytosol, peroxisome, plasma membrane	49.29	27.08
GSMUA_Achr9P16280_001	Banana	cytosol	16.75	10.92
GSMUA_Achr9P16290_001	Banana	endoplasmic reticulum, golgi	10.9	9.66

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.31.2	MapMan:23.1.2.6	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG09840_001	EnsemblPlants:GSMUA_AchrUn_randomP09840_001	EnsemblPlants:GSMUA_AchrUn_randomT09840_001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0U7U4	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR22967
PANTHER:PTHR22967:SF60	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI000295885E
SEG:seg	:	:	:	:	:

Description

Putative E3 ubiquitin-protein ligase KEG [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09840_001]

Coordinates

chrchrUn_random:+:47484806..47490773

Molecular Weight (calculated)

70759.9 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.298

Length

633 amino acids

Sequence
(BLAST)

001: MAGQVAASQP TESFEYMLLE GDPYHLRPVV STTTQNIPWI EPNVLKLKHR IGRGPFGDVC IATHHQSTND YEHYHEVAIK MLYPIKDDQI QTCLSKFDEV
101: FSKCQGLENV CLLDGVSLQN GRVCIAMKYY EGSIGDKMAR QKGGKLSLSD VLRYSADLAQ GVLELHRRGF LLLNLKPCNF LLDDHDRAVI GDFGIPFLLH
201: GFSLPCSDLV QRLGTPNYMA PEQWEPSING PISFETDSWG FGCSIVEMLS GIQPWHGRSP DEIYQLVVIK KEKPKIPHGL PPKMEDILHG CFEDDFRNRP
301: LMKDILRAFK SCDGATCSES DADHLMAEKS SHINYTNWSL LKDQLLVGDT VRSRKPTNSC KPESMEIPEG TIVGKETHAD SDGFILIRVH GVYNPLRVHC
401: SMVQRVTNGF VAGDWVRVMT DDKKQSPVGI LHNIERDGRV TVGFIGMDTL WKGHYSELQI AESYCVGQFL RVKTGISCPR FEWPHNHRGE WATGRISQIH
501: PNGCLVVKFP GKFSFGEATS FLADPSEMEV VSFKTCEGLA KKYQHLEDIH WAVRPLVIAL GLFTALKVGV FIGKSMGKSR RKKVGKVVNI SGQVEEQQQD
601: GQNGSNSSTN NSSKLHSLMY INSGLTFAGD ELT

Best Arabidopsis Sequence Match ( AT4G32250.3 )
(BLAST)

001: MASKIIAGKP DDTEYEIIEG ESESALAAGT SPWMNSSTLK LRHRIGRGPF GDVWLATHHQ STEDYDEHHE VAIKMLYPIK EDQRRVVVDK FEDLFSKCQG
101: LENVCLLRGV SSINGKICVV MKFYEGSLGD KMARLKGGKL SLPDVLRYGV DLATGILELH SKGFLILNLK PSNFLLSDND KAILGDVGIP YLLLSIPLPS
201: SDMTERLGTP NYMAPEQWQP DVRGPMSFET DSWGFGCSIV EMLTGVQPWS GRSADEIYDL VVRKQEKLSI PSSIPPPLEN LLRGCFMYDL RSRPSMTDIL
301: LVLKSLQNSE EEQVRRGIDS REIRKSSATL GYTEWFLSKD HLQVRDTVRS RKPANSCKHE NMDVPEGMVV GLERDSTDPD GFVLVKVHGV HDPLRVHVSV
401: LERVTNGLAS GDWVRLKVRK DKRHSPVGVL HSIDREGNVA VGFIGLPTLW KGTSSQLQMA KVYSVGQFVK LKANVVIPRF KWMRKGRGIW ATGRISQVLP
501: NGCLEVDFPG MLPFGEEHGS YLADPAEVEI VNFNTCQGAV EKYQHLEDFH WAVRPLLIAM GLLTAMKLGI CVRKKIGRSK DGKQRDGSTG QGDCKIPDGK
601: GSDKSKWLVF F

Arabidopsis Description

AT4g32250/F10M6_110 [Source:UniProtKB/TrEMBL;Acc:Q8RWX4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.