Factsheet for VIT_12s0028g02130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22278	Soybean	cytosol	79.93	80.62
KRH27052	Soybean	cytosol	79.56	80.25
PGSC0003DMT400039618	Potato	cytosol	32.31	78.81
Solyc07g055130.2.1	Tomato	cytosol	77.36	77.74
AT2G31010.2	Thale cress	cytosol	68.91	72.65
CDY23971	Canola	cytosol	67.07	72.39
CDX84808	Canola	cytosol	66.95	72.26
AT3G58640.1	Thale cress	cytosol	71.48	72.19
Bra021687.1-P	Field mustard	cytosol	64.63	71.84
CDY58984	Canola	cytosol	66.83	71.75
CDX97769	Canola	cytosol	66.59	71.48
CDY49240	Canola	cytosol	70.62	71.41
Bra007408.1-P	Field mustard	cytosol	70.62	71.41
CDX71938	Canola	cytosol	70.5	71.38
Bra022820.1-P	Field mustard	cytosol	66.22	71.28
GSMUA_Achr5P09170_001	Banana	cytosol	70.75	71.27
CDX67756	Canola	cytosol	67.2	71.02
CDX98314	Canola	cytosol	67.32	70.69
GSMUA_Achr4P08050_001	Banana	cytosol	65.73	69.2
Os01t0674100-02	Rice	cytosol	67.81	69.16
EES03424	Sorghum	cytosol	66.83	68.94
Bra003347.1-P	Field mustard	cytosol	63.89	68.68
TraesCS3B01G304900.1	Wheat	cytosol	66.71	68.47
TraesCS3D01G270900.1	Wheat	cytosol	66.34	68.18
TraesCS3A01G271100.1	Wheat	cytosol	66.1	67.84
Zm00001d043900_P022	Maize	cytosol	66.95	64.73
VIT_13s0074g00430.t01	Wine grape	cytosol	26.07	28.1
VIT_08s0007g03910.t01	Wine grape	cytosol	26.19	25.0
VIT_18s0001g07700.t01	Wine grape	cytosol	25.46	22.98
VIT_17s0000g02540.t01	Wine grape	cytosol	28.4	22.46
VIT_04s0008g01310.t01	Wine grape	cytosol, mitochondrion	25.09	22.43
VIT_14s0030g01440.t01	Wine grape	cytosol, plastid	26.68	22.11
VIT_05s0077g00920.t01	Wine grape	cytosol	18.24	19.33
VIT_02s0025g04110.t01	Wine grape	cytosol	14.2	18.59
VIT_19s0085g00550.t01	Wine grape	cytosol	17.75	12.4
VIT_11s0052g01480.t01	Wine grape	cytosol	16.52	11.88
VIT_05s0051g00660.t01	Wine grape	cytosol	17.38	11.67
VIT_01s0011g01490.t01	Wine grape	cytosol	17.01	11.23
VIT_11s0016g04880.t01	Wine grape	mitochondrion	13.1	10.48
VIT_11s0118g00790.t01	Wine grape	cytosol	16.52	9.47

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100255804	wikigene:100255804	MapMan:18.4.1.30	Gene3D:3.30.200.20	ProteinID:CBI21988
ProteinID:CBI21988.3	UniProt:E0CTS2	EMBL:FN595235	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100255804	wikigene:LOC100255804	PFAM:PF07714
PFAM:PF14381	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44514	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000198446E
ArrayExpress:VIT_12s0028g02130	EnsemblPlantsGene:VIT_12s0028g02130	EnsemblPlants:VIT_12s0028g02130.t01	unigene:Vvi.5327	RefSeq:XP_002280724	RefSeq:XP_002280724.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:2837360..2886960

Molecular Weight (calculated)

91578.2 Da

IEP (calculated)

6.344

GRAVY (calculated)

-0.365

Length

817 amino acids

Sequence
(BLAST)

001: MEETRDDAGP AEQGSPVTTW WPSDFIERFG SVSLVSQEEI LSNKNSNSNT EQDELSSQTA SQILWSTGML SEPIPNGFYS VIPDKKLKEI FDDIPTLDEL
101: YALGSEGVRA DIILVDAVRD KKLSMLKQLI VALVKGLNSN PAAVIKKIAG LVSDFYKRPN LELSPAKAAL EETSHVSENR VAQLLGQIKH GSCRPRAILF
201: KVLADTVGLE SRLMVGLPND GAIGCVDSYK HMSVIVMLNS GELLVDLMRF PGQLIPRSTR AIFMTHISAA GESDSAENDS CDSPLEPNSP LYGFSDRVDP
301: DSTEKDEGLQ FQRRLEASSN VSGPSLRNVM LRSTPSIDRK LSLSHSEPNI ATTFWRRSRR KVIAEQRTAS SSPEHPSFRA RGRSMLSGDR KSFRDYADDI
401: AASSYRSDGA STSTSETRRI RRRSISITPE IGDDIVRAVR AMNETLKANR LMRDQGDDRA FSSNPDIQKN VSDFHLDGHG EISHGSSSMY TLPREQISSQ
501: KAISLPSSPH EFRSQTSGRS GTSDIVNDEM VSIWNRVLEK PMFHSKPLLP FQEWNIDFSE LTVGTRVGIG FFGEVFRGIW NGTDVAIKVF LEQDLTAENM
601: EDFCNEISIL SRLRHPNVIL FLGACTKPPR LSMITEYMEI GSLYYLIHLS GQKKKLSWRR RIKMLRDICR GLMCIHRMKI VHRDIKSANC LVNKHWTVKI
701: CDFGLSRVMT DTPLRDSSSA GTPEWMAPEL IRNEPFTEKC DIFSFGMIMW ELCTLNRPWE GVPPERVVYA VAHEGSRLDI PEGPLGMLIA DCWAEPHQRP
801: SCEDILSRLQ DCEYTLC

Best Arabidopsis Sequence Match ( AT3G58640.2 )
(BLAST)

001: MGETGDDAGP SEQGPSNQTW WPSEFVEKFG SVYLGSQEET SSTKDSPRNL GQDGLPSSTA SNILWSTGSL SEPIPNGFYS VIPDNRLKQL FNNIPTLEDL
101: HALGDEGLKA DVILVDFQKD KKLFRQKQLI TKLVSGLNSK PATIIKKIAG LVADVYKQST LQSPAKSTQS FENCGIQLLG QIKHGSCRPR AILFKVLADT
201: VGLQSRLVVG LPSDGAAESV DSYSHISVTV LLNSVEMLVD LMRFPGQLIP LSTKAIFMSH ISAAGESDSA ENDSCDSPLE PNSPMFGYPE KFDHENAEKD
301: ENLSLHRKLD GSPNTSGPPS RNMLLRSASA LERKLSFSQS ESNMANEFWR QSRRKVIADQ RTASSSPEHL SFRARTKSML SGDKNLARDF TGDVATSSCK
401: SVGGAKMETK RIRRRSISIT PEIGDDIVRA VRAMNEALKQ NRLSKEQGDD DSSPNSPNDR TESSHLQKNV SGFHLDAHDQ VSGGRSTLSR EPLDPQKAIS
501: LPSSPQNYRS QYEQSGSSHR NISHIWDKVL GSPMFQNKPL LPYEEWNIDF SELTVGTRVG IGFFGEVFRG IWNGTDVAIK VFLEQDLTAE NMEDFCNEIS
601: ILSRLRHPNV ILFLGACTKP PRLSLITEYM EMGSLYYLLH LSGQKKRLSW RRKLKMLRDI CRGLMCIHRM GIVHRDIKSA NCLLSNKWTV KICDFGLSRI
701: MTGTTMRDTV SAGTPEWMAP ELIRNEPFSE KCDIFSLGVI MWELCTLTRP WEGVPPERVV YAIAYEGARL EIPEGPLGKL IADCWTEPEQ RPSCNEILSR
801: LLDCEYSLC

Arabidopsis Description

AT3g58640/F14P22_230 [Source:UniProtKB/TrEMBL;Acc:Q94AB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.