Factsheet for VIT_18s0001g07700.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52965	Soybean	cytosol	33.04	66.74
KRH62249	Soybean	nucleus	67.4	65.8
KRH16862	Soybean	nucleus	66.41	63.13
PGSC0003DMT400024156	Potato	cytosol	65.19	61.84
Solyc04g076480.2.1	Tomato	cytosol	65.08	61.48
CDY65536	Canola	cytosol	59.23	59.29
CDY61011	Canola	cytosol	59.45	59.06
AT4G24480.1	Thale cress	cytosol	61.77	58.47
Bra013806.1-P	Field mustard	cytosol	60.33	57.41
Os04t0610900-01	Rice	mitochondrion	47.96	55.78
TraesCS2B01G446500.2	Wheat	mitochondrion	46.96	55.63
TraesCS2D01G424300.1	Wheat	mitochondrion	46.96	55.56
TraesCS2A01G426200.3	Wheat	cytosol	46.96	55.56
GSMUA_Achr11P...	Banana	cytosol	51.82	54.35
Zm00001d002357_P007	Maize	cytosol	45.3	53.81
OQU82304	Sorghum	cytosol, mitochondrion, peroxisome, plastid	46.08	52.59
HORVU2Hr1G099570.13	Barley	mitochondrion	43.65	51.3
VIT_13s0074g00430.t01	Wine grape	cytosol	37.46	44.72
VIT_08s0007g03910.t01	Wine grape	cytosol	41.44	43.81
VIT_17s0000g02540.t01	Wine grape	cytosol	32.93	28.85
VIT_04s0008g01310.t01	Wine grape	cytosol, mitochondrion	28.84	28.56
VIT_14s0030g01440.t01	Wine grape	cytosol, plastid	28.73	26.37
VIT_05s0077g00920.t01	Wine grape	cytosol	22.32	26.2
VIT_02s0025g04110.t01	Wine grape	cytosol	17.57	25.48
VIT_12s0028g02130.t01	Wine grape	cytosol	22.98	25.46
VIT_19s0085g00550.t01	Wine grape	cytosol	19.23	14.88
VIT_01s0011g01490.t01	Wine grape	cytosol	18.12	13.25
VIT_11s0052g01480.t01	Wine grape	cytosol	16.57	13.2
VIT_05s0051g00660.t01	Wine grape	cytosol	17.57	13.06
VIT_11s0016g04880.t01	Wine grape	mitochondrion	13.37	11.85
VIT_11s0118g00790.t01	Wine grape	cytosol	17.79	11.3

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100254015	wikigene:100254015	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:AM465666
ProteinID:CAN68131	ProteinID:CAN68131.1	ProteinID:CBI19282	ProteinID:CBI19282.3	UniProt:E0CRX8	EMBL:FN595227
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100254015	wikigene:LOC100254015	PFAM:PF07714	PFAM:PF14381
PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44329	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC58635
UniParc:UPI0001BE1682	ArrayExpress:VIT_18s0001g07700	EnsemblPlantsGene:VIT_18s0001g07700	EnsemblPlants:VIT_18s0001g07700.t01	unigene:Vvi.10625	RefSeq:XP_003634421
RefSeq:XP_003634421.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:-:5939219..5949276

Molecular Weight (calculated)

101364.0 Da

IEP (calculated)

8.203

GRAVY (calculated)

-0.383

Length

905 amino acids

Sequence
(BLAST)

001: MPHRTTYFFP RQFPDRRFDA SSKELLAHEK KIGGESNRKG TRTTKDVTAD RTYNASDLFT GSDKFRSKKQ LAAFCDWLVE KKGDRSGHVR LRSRNDEGDR
101: DVLLPPPPAP VPEVVAGKDQ QFDRQVSLPR VSSGSSYAGS LFSGTTVEGN VSSGLKDSHT NSHSQESTRR EVDEEKESAA QKSRESYYLQ LTLAKRLASQ
201: ASLACEPVLF LQESGAEGNA VSFDPDVVSY RLWVSGCLSY TDKISDGFYN ILGMNPYVWV MCNELEEGRR LPPLMALKAV EPNDTSMEVV LVDRRGDSRL
301: KELEDKAHQL YCASENTLVL VEQLGKLVAI YMGGSFPVEQ GDLHKQWKLV SKRLRDFQKC IVLPIGSLSM GLCRHRAILF KKLADYIGLP CRIARGCKYC
401: VADHRSSCLV KIDDKQSSRE YVVDLVGEPG NVHGPDSSIT GGLLSSMPSP LQISHLKEYQ QPYMDNESCC QIQNSKNTCI YPEDPLYLGN EKNTLYTPTD
501: QICERMESSV LPLEFNGNTD RCIIQSAMLQ SVQSNVSEAV DASASGVSIH ECFRIAGEKI VIQQAHKKEI ALSGSPITSK ALKQPKVSLS SKSNIKEVEG
601: RLENRGRFHT VTIPRYLNLE PSLAMDWLEI SWDELHIKER VGAGSFGTVH RAEWHGSDVA VKVLTVQNFQ DDQLKEFLRE VAIMKRVRHP NVVLFMGAVT
701: KRPHLSIVTE YLPRGSLYRL IHRPTSAEIL DQRRRLRMAL DVAKGINYLH CLKPPIVHWD LKSPNLLVDK NWTVKVCDFG LSRFKANTFL SSKSVAGTPE
801: WMAPEFLRGE PSNEKSDVYS FGVILWELVT MQQPWNGLSP AQVVGAVAFQ NRRLSIPQNT SPVLASLMES CWADDPAQRP SFSSIVETLK KLLKSPLQLI
901: QMGGT

Best Arabidopsis Sequence Match ( AT4G24480.2 )
(BLAST)

001: MPHRTTYFFP RQFPDRGFDS FSLKNDHDKK KSSSNVGESF GFQRDNKSNG VGEDSNKEKE STVFSSNPLL SKSSAVSDLF SDDRKSEKKH QQQLAAFYEW
101: LAEKKANLSR SSSTTTTHGR GVKPTRFSMS SDADEERELL LSSPADPAPL PATSSPDSII DSARTVNIHE RNIDRSFDRE VSLPRMSSES SFAGSFFSGT
201: TVDGNFSNFS SHTDARETST TTLVSVNKEE EEVEVREQGK EQSLAQKSRE GYYLQVTLAK WLSSQANLAC ESVHIQSTES ISYRFWVSGC LSYSDKISDG
301: FYSILGMDPY LWLMCNNSED GKRIPSLLLL KETEPNDTSM EVVLIDRRED SRLKELEDKA HELYCSSDNM LVLVEKLGRL VAVYMGGNFQ VEQGDLQKRW
401: KLVSNRLKEF RKCIILPIGS LTMGLCRHRA ILFKKLADYI GLPCRIARGC RYCKESHQSS CLVKIDDDRK LSREYVVDLI GEPGNVHDPD SSINGETQCQ
501: IPSPLQMSHL TDFSRPCVHS TSPCQTVESK TSRTLSENIQ RSGSQGQVHK EFELPDNAGT VCCAHIDQTC CAKVSSMVLT ESVLRALPLD IPNLSEEKIA
601: PQETCKEETV LLEDPTAMKQ PNLSVEPEIV EADTRKDKKG RLPVDAISPY LTIEPSLASD WLEVSWNELH IKERVGAGSF GTVHRAEWHG SDVAVKILSI
701: QDFHDDQFRE FLREVAIMKR VRHPNVVLFM GAVTERPRLS IITEYLPRGS LFRLIHRPAS GELLDQRRRL RMALDVAKGL NYLHCLNPPV VHWDLKSPNL
801: LVDKNWTVKV CDFGLSRFKA NTFIPSKSVA GTPEWMAPEF LRGEPTNEKS DVYSFGVVLW ELITLQQPWN GLSPAQVVGA VAFQNRRLII PPNTSPVLVS
901: LMEACWADEP SQRPAFGSIV DTLKKLLKSP VQLIQMGGDK GVIPTKSAPI L

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JQX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.