Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012245 | Potato | plasma membrane | 58.06 | 91.98 |
| Solyc08g078780.2.1 | Tomato | plasma membrane | 78.16 | 65.51 |
| VIT_02s0154g00410.t01 | Wine grape | plasma membrane | 52.06 | 51.86 |
| CDY58173 | Canola | plasma membrane | 26.5 | 49.38 |
| AT5G47580.1 | Thale cress | plasma membrane | 47.67 | 47.86 |
| Bra009567.1-P | Field mustard | plasma membrane | 43.81 | 47.07 |
| CDY10425 | Canola | plasma membrane | 46.87 | 46.68 |
| KRH04114 | Soybean | plasma membrane | 47.0 | 46.45 |
| AT4G17250.1 | Thale cress | plasma membrane | 45.81 | 46.42 |
| Bra012672.1-P | Field mustard | endoplasmic reticulum, nucleus, plasma membrane | 45.67 | 46.23 |
| CDX90482 | Canola | plasma membrane | 45.67 | 46.16 |
| KRH57388 | Soybean | plasma membrane | 46.6 | 46.11 |
| CDY09637 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 45.14 | 45.75 |
| CDX70346 | Canola | plasma membrane | 43.81 | 45.32 |
| CDY50133 | Canola | cytosol | 19.44 | 40.9 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 38.75 | 40.76 |
| Solyc08g078760.1.1 | Tomato | plasma membrane | 36.75 | 37.5 |
| Solyc06g060660.1.1 | Tomato | plasma membrane | 24.9 | 36.24 |
| CDY58172 | Canola | mitochondrion | 6.92 | 35.37 |
| Bra021060.1-P | Field mustard | mitochondrion | 6.92 | 35.37 |
| CDX73467 | Canola | extracellular | 19.57 | 19.47 |
Protein Annotations
| EnsemblPlants:Solyc08g078770.1.1 | EnsemblPlantsGene:Solyc08g078770.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR35307 |
| PFscan:PS51257 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000276AEF5 | UniProt:K4CNN6 | MapMan:35.2 |
Description
No Description!
Coordinates
chr8:+:62497063..62499318
Molecular Weight (calculated)
84494.0 Da
IEP (calculated)
8.922
GRAVY (calculated)
0.091
Length
751 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRIGCTIDG NLNDSEFSQP MPWIGVYVAA ASAACALGMA MDAFHGLRYR KFWFPCNFFS LNATTLTLLA VATKLSVDLN TSMPRQQDQL TKLSSAALIC
101: TVIANFMPSL GLMENQELLM NIMALGIFVI TAIVNIGIQL ATGVIYVFFK EHIALMFLML VLLLLLISSA VTIPTTKRYL DLKYKKKYKL ANKECNIMGT
201: CTAEKLKYEL MKFWTMAYTS CPHFVGGRLV TCTASGVFCL MSTGIYADAM FRSYILHKSF NFCSGDSEYK WSSTLILVTH TVAIGVGAIA PAFRWFRAIN
301: FNCPKKANNA CKLKLFKVEN YWIRILLQWK ECPLDFRYCG RHGKKFAHKS KNKLLDLCIL VQIMMVSLSK LVRLVSIFSV SQSLIYCRKA IKMLKCYSMM
401: SSLDTELGSQ TSSKPDLSCY ALHLEGEEAL IDLMMQSNSD LVNHWIGIGK KKQPKHLLRL LEKLKSSPGF RGVHKFDSAH IPSLNSENPP NCWALPVVTL
501: TSIAIALPNI NFHSIKELIK CVNEGLMYIK VVEDNLDARK DLANIRRAAE LVWLEVDLCY KWLDVDLRKI ATEGQNPKHM LESLSEKAKQ RFIEFRKKDS
601: TVCPKESPSK WPINMLAANS MYRICQTLLV SSDSIEFENS KIMFDKLSSM ITDITGACLT NLQRVMQCHH GTITERSKGV RSAILLLGKA ENILEILRSQ
701: PLPSSVPDQL SKIDHWCTLS KEEDYLSCSR SSTSNCTPTS QSSSDLYLNV D
101: TVIANFMPSL GLMENQELLM NIMALGIFVI TAIVNIGIQL ATGVIYVFFK EHIALMFLML VLLLLLISSA VTIPTTKRYL DLKYKKKYKL ANKECNIMGT
201: CTAEKLKYEL MKFWTMAYTS CPHFVGGRLV TCTASGVFCL MSTGIYADAM FRSYILHKSF NFCSGDSEYK WSSTLILVTH TVAIGVGAIA PAFRWFRAIN
301: FNCPKKANNA CKLKLFKVEN YWIRILLQWK ECPLDFRYCG RHGKKFAHKS KNKLLDLCIL VQIMMVSLSK LVRLVSIFSV SQSLIYCRKA IKMLKCYSMM
401: SSLDTELGSQ TSSKPDLSCY ALHLEGEEAL IDLMMQSNSD LVNHWIGIGK KKQPKHLLRL LEKLKSSPGF RGVHKFDSAH IPSLNSENPP NCWALPVVTL
501: TSIAIALPNI NFHSIKELIK CVNEGLMYIK VVEDNLDARK DLANIRRAAE LVWLEVDLCY KWLDVDLRKI ATEGQNPKHM LESLSEKAKQ RFIEFRKKDS
601: TVCPKESPSK WPINMLAANS MYRICQTLLV SSDSIEFENS KIMFDKLSSM ITDITGACLT NLQRVMQCHH GTITERSKGV RSAILLLGKA ENILEILRSQ
701: PLPSSVPDQL SKIDHWCTLS KEEDYLSCSR SSTSNCTPTS QSSSDLYLNV D
001: MGILGCDAHG DLNDAEFSKP LPSIGIYVAV ASLICGLAMA ADLIHGFRHR KFWFPCKFFS LNATSLTFIA VGIKLSVDLN TSMPSRQDQL AKLSSTVFVC
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
Arabidopsis Description
AT5g47580/MNJ7_17 [Source:UniProtKB/TrEMBL;Acc:Q9FGJ9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.