Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70346 | Canola | plasma membrane | 91.64 | 95.18 |
| AT5G47580.1 | Thale cress | plasma membrane | 79.18 | 79.81 |
| CDY09637 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 63.79 | 64.91 |
| CDX90482 | Canola | plasma membrane | 63.53 | 64.47 |
| CDY58173 | Canola | plasma membrane | 33.55 | 62.78 |
| CDY50133 | Canola | cytosol | 27.32 | 57.7 |
| CDY58172 | Canola | mitochondrion | 10.34 | 53.06 |
| PGSC0003DMT400012241 | Potato | cytosol, extracellular, plasma membrane | 26.53 | 50.0 |
| PGSC0003DMT400012245 | Potato | plasma membrane | 30.5 | 48.52 |
| VIT_02s0154g00410.t01 | Wine grape | plasma membrane | 48.28 | 48.28 |
| KRH04114 | Soybean | plasma membrane | 48.14 | 47.76 |
| KRH57388 | Soybean | plasma membrane | 47.35 | 47.04 |
| Solyc08g078770.1.1 | Tomato | nucleus | 46.68 | 46.87 |
| PGSC0003DMT400012244 | Potato | plasma membrane | 45.89 | 46.07 |
| CDX73467 | Canola | extracellular | 42.84 | 42.78 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 38.59 | 40.76 |
| PGSC0003DMT400012242 | Potato | cytosol | 16.98 | 40.13 |
| Solyc08g078780.2.1 | Tomato | plasma membrane | 45.62 | 38.39 |
Protein Annotations
| EnsemblPlants:CDY10425 | EnsemblPlantsGene:GSBRNA2T00032344001 | GO:A0A078F7D8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR35307 | ProteinID:CDY10425 | ProteinID:CDY10425.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EBD583 |
| UniProt:A0A078F7D8 | MapMan:35.2 | : | : | : | : |
Description
BnaCnng03260DBnaCnng03260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7D8]
Coordinates
chrLK032003:+:411951..414340
Molecular Weight (calculated)
84568.3 Da
IEP (calculated)
8.503
GRAVY (calculated)
0.052
Length
754 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLGCDAHG VLNDAEFSKP MPSIGLYVAI ASLICALAMA ADLLHGFRHR KFWFPCKYFS LNATSLTFIG VGIKLSVDLN TSMPSRHDQL SKLSSSVFVC
101: TVMGNSMPSL GIMDNKDLLM NLVALAILVV TDVVNICIQL GTGAIYVFKE EHFMVVLLMM LMLLIMSFSA TTVPTTKRIL ETKYKKKYEV ALKCPLATER
201: TTVSKKIQQD LSKFWMMAHT SSPQFVMARS VTCTASGFFC LLSAVTLGEA VVRSYLLRPG TTMLEFCRGD SDYKWSTSLV LVCQGSAVAV GTVAPAIRWF
301: TAVKFRCPIR GSRSYKEEFR VESYWTQWFS EKKQRPLPLS RLSILKDRSC RKTAHDAKRW LLDVCIGVQY VIVFASKIIR YVSVYCVSRI LICLHLAFRA
401: TGRSTVSHVD SEMSGGGSRQ ELASFVLHLE GEDELVDLMV RSNREATDHW VKKGRKNQPV NLIELLEANT KISKGFEGIR EFDSSEVASL APSGEPPNCW
501: ALPLVTMTTI ALSLPNVKPC SVKRLLNAVN EALDSVNKFE CVLDTGGELA NLRKAAEVVW LGVDLYHKWF DVDLRKLSKQ EKTPEETLRE LAEVANREFS
601: ESWQMNLMVC MKHKPSHWPI KTLAANSMYR ICQTILLNYE TRDYGTGEAL LRKLETTISD IVSGCFCNVV QVVSVKCLVT AVEVREESVR GAALHLGRTE
701: KILEIVERRR LPELRCDQLK NIDEWRAFYK MNSSDCSSRK TVSSESNEVC ITVD
101: TVMGNSMPSL GIMDNKDLLM NLVALAILVV TDVVNICIQL GTGAIYVFKE EHFMVVLLMM LMLLIMSFSA TTVPTTKRIL ETKYKKKYEV ALKCPLATER
201: TTVSKKIQQD LSKFWMMAHT SSPQFVMARS VTCTASGFFC LLSAVTLGEA VVRSYLLRPG TTMLEFCRGD SDYKWSTSLV LVCQGSAVAV GTVAPAIRWF
301: TAVKFRCPIR GSRSYKEEFR VESYWTQWFS EKKQRPLPLS RLSILKDRSC RKTAHDAKRW LLDVCIGVQY VIVFASKIIR YVSVYCVSRI LICLHLAFRA
401: TGRSTVSHVD SEMSGGGSRQ ELASFVLHLE GEDELVDLMV RSNREATDHW VKKGRKNQPV NLIELLEANT KISKGFEGIR EFDSSEVASL APSGEPPNCW
501: ALPLVTMTTI ALSLPNVKPC SVKRLLNAVN EALDSVNKFE CVLDTGGELA NLRKAAEVVW LGVDLYHKWF DVDLRKLSKQ EKTPEETLRE LAEVANREFS
601: ESWQMNLMVC MKHKPSHWPI KTLAANSMYR ICQTILLNYE TRDYGTGEAL LRKLETTISD IVSGCFCNVV QVVSVKCLVT AVEVREESVR GAALHLGRTE
701: KILEIVERRR LPELRCDQLK NIDEWRAFYK MNSSDCSSRK TVSSESNEVC ITVD
001: MGILGCDAHG DLNDAEFSKP LPSIGIYVAV ASLICGLAMA ADLIHGFRHR KFWFPCKFFS LNATSLTFIA VGIKLSVDLN TSMPSRQDQL AKLSSTVFVC
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
Arabidopsis Description
AT5g47580/MNJ7_17 [Source:UniProtKB/TrEMBL;Acc:Q9FGJ9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.