Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0154g00430.t01 | Wine grape | cytosol | 11.67 | 85.44 |
| VIT_02s0154g00440.t01 | Wine grape | cytosol, plasma membrane, plastid | 29.58 | 71.47 |
| PGSC0003DMT400012241 | Potato | cytosol, extracellular, plasma membrane | 29.18 | 55.0 |
| PGSC0003DMT400012245 | Potato | plasma membrane | 34.22 | 54.43 |
| CDY58173 | Canola | plasma membrane | 28.25 | 52.85 |
| Solyc08g078770.1.1 | Tomato | nucleus | 51.86 | 52.06 |
| PGSC0003DMT400012244 | Potato | plasma membrane | 51.46 | 51.66 |
| KRH04114 | Soybean | plasma membrane | 50.13 | 49.74 |
| AT5G47580.1 | Thale cress | plasma membrane | 48.67 | 49.06 |
| Bra009567.1-P | Field mustard | plasma membrane | 45.36 | 48.93 |
| Bra012672.1-P | Field mustard | endoplasmic reticulum, nucleus, plasma membrane | 48.14 | 48.92 |
| KRH57388 | Soybean | plasma membrane | 49.2 | 48.88 |
| CDX90482 | Canola | plasma membrane | 47.88 | 48.59 |
| AT4G17250.1 | Thale cress | plasma membrane | 47.61 | 48.45 |
| CDY09637 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 47.48 | 48.31 |
| CDY10425 | Canola | plasma membrane | 48.28 | 48.28 |
| CDX70346 | Canola | plasma membrane | 44.83 | 46.56 |
| PGSC0003DMT400012242 | Potato | cytosol | 18.83 | 44.51 |
| Solyc08g078780.2.1 | Tomato | plasma membrane | 50.4 | 42.41 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 40.05 | 42.3 |
| CDY50133 | Canola | cytosol | 19.5 | 41.18 |
| CDY58172 | Canola | mitochondrion | 7.03 | 36.05 |
| Bra021060.1-P | Field mustard | mitochondrion | 7.03 | 36.05 |
| CDX73467 | Canola | extracellular | 19.89 | 19.87 |
Protein Annotations
| EntrezGene:100262529 | wikigene:100262529 | MapMan:35.2 | EMBL:AM426135 | ProteinID:CAN71257 | ProteinID:CAN71257.1 |
| ProteinID:CCB56513 | ProteinID:CCB56513.1 | ncoils:Coil | UniProt:F6HPA7 | EMBL:FN596001 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100262529 | wikigene:LOC100262529 | PANTHER:PTHR35307 | TMHMM:TMhelix |
| UniParc:UPI00015CDCD3 | ArrayExpress:VIT_02s0154g00410 | EnsemblPlantsGene:VIT_02s0154g00410 | EnsemblPlants:VIT_02s0154g00410.t01 | RefSeq:XP_002266701 | RefSeq:XP_002266701.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:5221918..5224224
Molecular Weight (calculated)
85133.1 Da
IEP (calculated)
8.588
GRAVY (calculated)
0.153
Length
754 amino acids
Sequence
(BLAST)
(BLAST)
001: MVWQGCNIDG SVNDSNFNEP MPWIGIYVAA ASLVCSLAMG ADAFLALRHK KFWFPCKFFS LNATSLTIIA VATKLSVDLN TSMPRCQDQL SKLSSTVMMC
101: TVMGNFMPSI GTMENKEVFS NVIALGILVI TLMVNVCIQM GTGVIYVYWK EHAVVMFIML VLLLILSFSA LTVPTTKHYF ELKYRKKYEI AVKESSNETD
201: IPVFKKLRED LMKYWIMAHS SCPQFVIGRS VTCTASGALC LLSAAILVEA WIRSYLMPWS FKFCSGESDY KWSVTLILIS QTVAVGVGTI GPAFRWFVAI
301: LLRCPKKGGK SFKDEFKVEK YWVQRLVEWR GCPIGLPIHG RHCRKLAHDT RNLLADLCIR IQTGIVLVSK AVRLVSIFFI RFLLIFSCWF MELRRKLKLN
401: NSISNNESGS ESLQPNLKPD LSRFVLYLEG EENLVDLMAK SNCNATDCWI SMGRKTQPKY LMQLLEKHMS SQGFKGLETF DSDKVPSLDY KKVPNCWALP
501: VVILTTIAVS LPNIDKSSIK RLMRGVNEGL RYVRLIDQNL DDKEKLINIR KAADTVWLEV DLYHKWLGVD IRKMALQAKG PKEVVEELAD IAKNRIMEYS
601: QKTTAGCLNE TPSKLPMKVL AANSMYRIAQ TILLNDKWIN EQMSVKLFEE LSVGISDILA ACLTNIPRVI HMECISSIIE ERAVRVGHAI FTLGLTEKIL
701: KLLDQKALPC LVTNKMTCVD DWHLSSKQHQ LHFAPSSDCE TEALNSGDLC LSID
101: TVMGNFMPSI GTMENKEVFS NVIALGILVI TLMVNVCIQM GTGVIYVYWK EHAVVMFIML VLLLILSFSA LTVPTTKHYF ELKYRKKYEI AVKESSNETD
201: IPVFKKLRED LMKYWIMAHS SCPQFVIGRS VTCTASGALC LLSAAILVEA WIRSYLMPWS FKFCSGESDY KWSVTLILIS QTVAVGVGTI GPAFRWFVAI
301: LLRCPKKGGK SFKDEFKVEK YWVQRLVEWR GCPIGLPIHG RHCRKLAHDT RNLLADLCIR IQTGIVLVSK AVRLVSIFFI RFLLIFSCWF MELRRKLKLN
401: NSISNNESGS ESLQPNLKPD LSRFVLYLEG EENLVDLMAK SNCNATDCWI SMGRKTQPKY LMQLLEKHMS SQGFKGLETF DSDKVPSLDY KKVPNCWALP
501: VVILTTIAVS LPNIDKSSIK RLMRGVNEGL RYVRLIDQNL DDKEKLINIR KAADTVWLEV DLYHKWLGVD IRKMALQAKG PKEVVEELAD IAKNRIMEYS
601: QKTTAGCLNE TPSKLPMKVL AANSMYRIAQ TILLNDKWIN EQMSVKLFEE LSVGISDILA ACLTNIPRVI HMECISSIIE ERAVRVGHAI FTLGLTEKIL
701: KLLDQKALPC LVTNKMTCVD DWHLSSKQHQ LHFAPSSDCE TEALNSGDLC LSID
001: MGCDSHGNLS DTEFSKPLPS IGVYVAAASL ICGVAMFSDL LHGFRHRKFW FPCKFFSLNA TTLTFISVCV KLSLDLNTSM PSRQDQLAKL SSSVFVCTVM
101: ANSMPSLGYM VTQDLLMNLT ALGILVITDV VNICIQLGTG AIYVFPQEHA LVIILMLLMF MILSFSAITV PATKRFLELK YKKRYEFALK QCPSYTERRR
201: GVPKLKEDLM KFWMMAHTSS PQFVMARSVT CTTTGFLCFL IAITLAEAMV RSYFLQPRSL GFCNGDSDYK WSTTLVLVSQ TAAVAIGTVA PASRWLKAVN
301: FRCPFRNKKS LKDELRVESY WVECLAEKKE RPLNFWMLHG RCSRKLAHDL NRLMLDICIA TQYGIVLASK FLRFITVYCS SRILLCCFHF TFKSDSVANA
401: ESSGSNPSTR QFVLHLEGEE EMVDYMARSN RVATDHLIQK GRKKQPVNLI ELLEATTFIS KGFEGIRDFD SDEVSSLASG EPPNSWALPL VTLTSIAVAL
501: PNIKPCSLKK LVKAVNEALV YVNKFEEVLD IEGELANSRK AAEVVWLGVD LYHKWLNVDL RKLSKQHSKT PQEVLKELVD IAQKEFTESW EKNRILCMKH
601: KPSHWPIKTQ AANSMYRISQ TLLMKYESRN IETEETLLKD VEKMVSDIVS GCFCNTAQVI GMKCLVTAVE VREASVREAA MHLGRTEKIL EIVDRRCMPA
701: LSHHKVAKID EWREFYRTNK SITFTHPSSQ CTTRELIINL E
101: ANSMPSLGYM VTQDLLMNLT ALGILVITDV VNICIQLGTG AIYVFPQEHA LVIILMLLMF MILSFSAITV PATKRFLELK YKKRYEFALK QCPSYTERRR
201: GVPKLKEDLM KFWMMAHTSS PQFVMARSVT CTTTGFLCFL IAITLAEAMV RSYFLQPRSL GFCNGDSDYK WSTTLVLVSQ TAAVAIGTVA PASRWLKAVN
301: FRCPFRNKKS LKDELRVESY WVECLAEKKE RPLNFWMLHG RCSRKLAHDL NRLMLDICIA TQYGIVLASK FLRFITVYCS SRILLCCFHF TFKSDSVANA
401: ESSGSNPSTR QFVLHLEGEE EMVDYMARSN RVATDHLIQK GRKKQPVNLI ELLEATTFIS KGFEGIRDFD SDEVSSLASG EPPNSWALPL VTLTSIAVAL
501: PNIKPCSLKK LVKAVNEALV YVNKFEEVLD IEGELANSRK AAEVVWLGVD LYHKWLNVDL RKLSKQHSKT PQEVLKELVD IAQKEFTESW EKNRILCMKH
601: KPSHWPIKTQ AANSMYRISQ TLLMKYESRN IETEETLLKD VEKMVSDIVS GCFCNTAQVI GMKCLVTAVE VREASVREAA MHLGRTEKIL EIVDRRCMPA
701: LSHHKVAKID EWREFYRTNK SITFTHPSSQ CTTRELIINL E
Arabidopsis Description
At4g17250/dl4660w [Source:UniProtKB/TrEMBL;Acc:Q93ZA8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.