Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086734 | Potato | plasma membrane | 40.38 | 38.18 |
| VIT_02s0154g00410.t01 | Wine grape | plasma membrane | 71.47 | 29.58 |
| Solyc06g060660.1.1 | Tomato | plasma membrane | 37.18 | 22.48 |
| Solyc08g078760.1.1 | Tomato | plasma membrane | 39.74 | 16.85 |
| PGSC0003DMT400035852 | Potato | plasma membrane | 36.54 | 16.67 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 34.94 | 15.27 |
| VIT_02s0154g00430.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_02s0154g00440 | EMBL:AM426135 | EMBL:FN596001 | EnsemblPlants:VIT_02s0154g00440.t01 | EnsemblPlantsGene:VIT_02s0154g00440 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR35307 | ProteinID:CAN71255 | ProteinID:CAN71255.1 | ProteinID:CCB56516 |
| ProteinID:CCB56516.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0001982D3A | UniProt:F6HPB0 | MapMan:35.2 |
Description
No Description!
Coordinates
chr2:-:5227787..5228725
Molecular Weight (calculated)
35053.3 Da
IEP (calculated)
8.777
GRAVY (calculated)
0.361
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPNHHLDQN INGPLQFNFQ ITLCRLWYVA PGKNKITLNS VAEQRAIARY RSEGKKKMVW QGCSIHGSVN DSNFNEPMPW IGIYVAAASL VCSLAMGADA
101: FLAFRHTKFW FPCKVFSLNV TSLTIIAVAT NLSVDLNTSM PRCQDQLSKL SSTVLMCTVM GNFMPSIGTT ENKEVFSNVI ALDILMITLM VNVCIKMGTG
201: VIYVFWKEHA VLMFIMLVLL LILSFSALTV PTTKHYFEFK YCKTYEITVR ESSNEAGIPV FKKLREDLMK YWTMAYTCCP QFVKGRSVTC TAAGALCLFS
301: AAILVEAWLF VS
101: FLAFRHTKFW FPCKVFSLNV TSLTIIAVAT NLSVDLNTSM PRCQDQLSKL SSTVLMCTVM GNFMPSIGTT ENKEVFSNVI ALDILMITLM VNVCIKMGTG
201: VIYVFWKEHA VLMFIMLVLL LILSFSALTV PTTKHYFEFK YCKTYEITVR ESSNEAGIPV FKKLREDLMK YWTMAYTCCP QFVKGRSVTC TAAGALCLFS
301: AAILVEAWLF VS
001: MGCDSHGNLS DTEFSKPLPS IGVYVAAASL ICGVAMFSDL LHGFRHRKFW FPCKFFSLNA TTLTFISVCV KLSLDLNTSM PSRQDQLAKL SSSVFVCTVM
101: ANSMPSLGYM VTQDLLMNLT ALGILVITDV VNICIQLGTG AIYVFPQEHA LVIILMLLMF MILSFSAITV PATKRFLELK YKKRYEFALK QCPSYTERRR
201: GVPKLKEDLM KFWMMAHTSS PQFVMARSVT CTTTGFLCFL IAITLAEAMV RSYFLQPRSL GFCNGDSDYK WSTTLVLVSQ TAAVAIGTVA PASRWLKAVN
301: FRCPFRNKKS LKDELRVESY WVECLAEKKE RPLNFWMLHG RCSRKLAHDL NRLMLDICIA TQYGIVLASK FLRFITVYCS SRILLCCFHF TFKSDSVANA
401: ESSGSNPSTR QFVLHLEGEE EMVDYMARSN RVATDHLIQK GRKKQPVNLI ELLEATTFIS KGFEGIRDFD SDEVSSLASG EPPNSWALPL VTLTSIAVAL
501: PNIKPCSLKK LVKAVNEALV YVNKFEEVLD IEGELANSRK AAEVVWLGVD LYHKWLNVDL RKLSKQHSKT PQEVLKELVD IAQKEFTESW EKNRILCMKH
601: KPSHWPIKTQ AANSMYRISQ TLLMNSGSEG SVGERSGNAF GENREDT
101: ANSMPSLGYM VTQDLLMNLT ALGILVITDV VNICIQLGTG AIYVFPQEHA LVIILMLLMF MILSFSAITV PATKRFLELK YKKRYEFALK QCPSYTERRR
201: GVPKLKEDLM KFWMMAHTSS PQFVMARSVT CTTTGFLCFL IAITLAEAMV RSYFLQPRSL GFCNGDSDYK WSTTLVLVSQ TAAVAIGTVA PASRWLKAVN
301: FRCPFRNKKS LKDELRVESY WVECLAEKKE RPLNFWMLHG RCSRKLAHDL NRLMLDICIA TQYGIVLASK FLRFITVYCS SRILLCCFHF TFKSDSVANA
401: ESSGSNPSTR QFVLHLEGEE EMVDYMARSN RVATDHLIQK GRKKQPVNLI ELLEATTFIS KGFEGIRDFD SDEVSSLASG EPPNSWALPL VTLTSIAVAL
501: PNIKPCSLKK LVKAVNEALV YVNKFEEVLD IEGELANSRK AAEVVWLGVD LYHKWLNVDL RKLSKQHSKT PQEVLKELVD IAQKEFTESW EKNRILCMKH
601: KPSHWPIKTQ AANSMYRISQ TLLMNSGSEG SVGERSGNAF GENREDT
Arabidopsis Description
At4g17250/dl4660w [Source:UniProtKB/TrEMBL;Acc:Q93ZA8]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.