Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0154g00410.t01 | Wine grape | plasma membrane | 85.44 | 11.67 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 44.66 | 6.44 |
| Solyc08g078760.1.1 | Tomato | plasma membrane | 38.84 | 5.43 |
| PGSC0003DMT400035852 | Potato | plasma membrane | 31.07 | 4.68 |
| Solyc06g060660.1.1 | Tomato | plasma membrane | 21.36 | 4.26 |
| PGSC0003DMT400086734 | Potato | plasma membrane | 0.0 | 0.0 |
| VIT_02s0154g00440.t01 | Wine grape | cytosol, plasma membrane, plastid | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_02s0154g00430 | EMBL:FN596001 | EnsemblPlants:VIT_02s0154g00430.t01 | EnsemblPlantsGene:VIT_02s0154g00430 | PANTHER:PTHR35307 | ProteinID:CCB56515 |
| ProteinID:CCB56515.1 | UniParc:UPI0002108559 | UniProt:F6HPA9 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2:-:5227378..5227786
Molecular Weight (calculated)
11761.4 Da
IEP (calculated)
8.219
GRAVY (calculated)
-0.052
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLLEKHMSS QGFKGVETFD SDKVPSLDYK EVPNCWALPV VTLTTIAVAL PHIEKCSIKR LMRSVNEGLS YVRLIVQNLD DKELINIRKA AYTVWLGVDL
101: YHK
101: YHK
001: MANSMPSLGY MVTQDLLMNL TALGILVITD VVNICIQLGT GAIYVFPQEH ALVIILMLLM FMILSFSAIT VPATKRFLEL KYKKRYEFAL KQCPSYTERR
101: RGVPKLKEDL MKFWMMAHTS SPQFVMARSV TCTTTGFLCF LIAITLAEAM VRSYFLQPRS LGFCNGDSDY KWSTTLVLVS QTAAVAIGTV APASRWLKAV
201: NFRCPFRNKK SLKDELRVES YWVECLAEKK ERPLNFWMLH GRCSRKLAHD LNRLMLDICI ATQYGIVLAS KFLRFITVYC SSRILLCCFH FTFKSDSVAN
301: AESSGSNPST RQFVLHLEGE EEMVDYMARS NRVATDHLIQ KGRKKQPVNL IELLEATTFI SKGFEGIRDF DSDEVSSLAS GEPPNSWALP LVTLTSIAVA
401: LPNIKPCSLK KLVKAVNEAL VYVNKFEEVL DIEGELANSR KAAEVVWLGV DLYHKWLNVD LRKLSKQHSK TPQEVLKELV DIAQKEFTES WEKNRILCMK
501: HKPSHWPIKT QAANSMYRIS QTLLMKYESR NIETEETLLK DVEKMVSDIV SGCFCNTAQV IGMKCLVTAV EVREASVREA AMHLGRTEKI LEIVDRRCMP
601: ALSHHKVAKI DEWREFYRTN KSITFTHPSS QCTTRELIIN LE
101: RGVPKLKEDL MKFWMMAHTS SPQFVMARSV TCTTTGFLCF LIAITLAEAM VRSYFLQPRS LGFCNGDSDY KWSTTLVLVS QTAAVAIGTV APASRWLKAV
201: NFRCPFRNKK SLKDELRVES YWVECLAEKK ERPLNFWMLH GRCSRKLAHD LNRLMLDICI ATQYGIVLAS KFLRFITVYC SSRILLCCFH FTFKSDSVAN
301: AESSGSNPST RQFVLHLEGE EEMVDYMARS NRVATDHLIQ KGRKKQPVNL IELLEATTFI SKGFEGIRDF DSDEVSSLAS GEPPNSWALP LVTLTSIAVA
401: LPNIKPCSLK KLVKAVNEAL VYVNKFEEVL DIEGELANSR KAAEVVWLGV DLYHKWLNVD LRKLSKQHSK TPQEVLKELV DIAQKEFTES WEKNRILCMK
501: HKPSHWPIKT QAANSMYRIS QTLLMKYESR NIETEETLLK DVEKMVSDIV SGCFCNTAQV IGMKCLVTAV EVREASVREA AMHLGRTEKI LEIVDRRCMP
601: ALSHHKVAKI DEWREFYRTN KSITFTHPSS QCTTRELIIN LE
Arabidopsis Description
At4g17250/dl4660w [Source:UniProtKB/TrEMBL;Acc:Q93ZA8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.