Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g060660.1.1 | Tomato | plasma membrane | 67.84 | 89.92 |
| PGSC0003DMT400086734 | Potato | plasma membrane | 18.86 | 39.09 |
| VIT_02s0154g00440.t01 | Wine grape | cytosol, plasma membrane, plastid | 16.67 | 36.54 |
| PGSC0003DMT400012245 | Potato | plasma membrane | 25.0 | 36.08 |
| PGSC0003DMT400012241 | Potato | cytosol, extracellular, plasma membrane | 20.91 | 35.75 |
| PGSC0003DMT400012244 | Potato | plasma membrane | 36.26 | 33.02 |
| VIT_02s0154g00430.t01 | Wine grape | cytosol | 4.68 | 31.07 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 32.16 | 30.81 |
| PGSC0003DMT400012242 | Potato | cytosol | 12.43 | 26.65 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400035852 | EnsemblPlantsGene:PGSC0003DMG400013805 | EntrezGene:107058862 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR35307 | PGSC:PGSC0003DMG400013805 | RefSeq:XP_015160544.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000295AAD6 | UniProt:M1B2W5 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400013805]
Coordinates
chr6:-:43677988..43680042
Molecular Weight (calculated)
77370.7 Da
IEP (calculated)
6.084
GRAVY (calculated)
0.115
Length
684 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHHDNFSAP MPWIGRYIVA ASLICILAML ADAVQGIRSR KFWLPCRFFT FNAASLTLLG VVVKLPLDLN NPMPGKIDQM AKLSSVVFMS TAMANFMPSL
101: ALMDNKDILM GMTALGILVI TLVVNVCIEL GTGIIYSEKT EHIVVMLSMV FLFVIMCFSA LTVPTIKSYL ELEYRERGNM IEIDYLVDGE KPVEVKLKEN
201: LSKFFVMAKT GNPQFVMARS ATCAACCAIC CLNCLLLLEV SFRDNLFDAH VLSMSDYRRS TYCISRIQSA GVAVGTVSSL IRWFAIATIK SSSKSISIKV
301: ERHWLERLKD WKDSPFALEI KNPKCRKLVQ QIQNIILLNC IRVQILIVVA SKIVQLFPIL LLSLLRSCFY SSLQCNNIIS SVSESAENLE EDISRYVLHL
401: EGEEELTQVT ANKRDDTTWM MEIGRKQQPK HLIELLQKLT DFRGVSKFDI NQFQEPHIGW KMSIVTLTAI ATTIPNIDHK MVDSLLLSVS QGLKYVSFIE
501: DILGTNENSE KNKQAADVVW LELYLYRRWL DQDLQKMDLQ GKTSKEILDN FADIAQDYAT KDDYSRKLTE VIAGNSMYQM SQIILQDSEK IDDQTEVHLF
601: NHISAMIASV LGAYLINMPF AITKKCSSNA IEMREENVQH AIRLLGETEE IIKFIQQHEK VTPTNSSNSD SDSSSLDEIR IPIE
101: ALMDNKDILM GMTALGILVI TLVVNVCIEL GTGIIYSEKT EHIVVMLSMV FLFVIMCFSA LTVPTIKSYL ELEYRERGNM IEIDYLVDGE KPVEVKLKEN
201: LSKFFVMAKT GNPQFVMARS ATCAACCAIC CLNCLLLLEV SFRDNLFDAH VLSMSDYRRS TYCISRIQSA GVAVGTVSSL IRWFAIATIK SSSKSISIKV
301: ERHWLERLKD WKDSPFALEI KNPKCRKLVQ QIQNIILLNC IRVQILIVVA SKIVQLFPIL LLSLLRSCFY SSLQCNNIIS SVSESAENLE EDISRYVLHL
401: EGEEELTQVT ANKRDDTTWM MEIGRKQQPK HLIELLQKLT DFRGVSKFDI NQFQEPHIGW KMSIVTLTAI ATTIPNIDHK MVDSLLLSVS QGLKYVSFIE
501: DILGTNENSE KNKQAADVVW LELYLYRRWL DQDLQKMDLQ GKTSKEILDN FADIAQDYAT KDDYSRKLTE VIAGNSMYQM SQIILQDSEK IDDQTEVHLF
601: NHISAMIASV LGAYLINMPF AITKKCSSNA IEMREENVQH AIRLLGETEE IIKFIQQHEK VTPTNSSNSD SDSSSLDEIR IPIE
001: MGILGCDAHG DLNDAEFSKP LPSIGIYVAV ASLICGLAMA ADLIHGFRHR KFWFPCKFFS LNATSLTFIA VGIKLSVDLN TSMPSRQDQL AKLSSTVFVC
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
Arabidopsis Description
AT5g47580/MNJ7_17 [Source:UniProtKB/TrEMBL;Acc:Q9FGJ9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.