Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58172 | Canola | mitochondrion | 40.06 | 97.28 |
| PGSC0003DMT400012242 | Potato | cytosol | 34.73 | 38.87 |
| CDX90482 | Canola | plasma membrane | 71.15 | 34.19 |
| CDY09637 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 70.31 | 33.87 |
| CDX70346 | Canola | plasma membrane | 55.74 | 27.41 |
| CDY10425 | Canola | plasma membrane | 57.7 | 27.32 |
| CDX73467 | Canola | extracellular | 53.22 | 25.17 |
| VIT_02s0154g00410.t01 | Wine grape | plasma membrane | 41.18 | 19.5 |
| Solyc08g078770.1.1 | Tomato | nucleus | 40.9 | 19.44 |
| KRH04114 | Soybean | plasma membrane | 39.5 | 18.55 |
| PGSC0003DMT400012244 | Potato | plasma membrane | 38.94 | 18.51 |
| KRH57388 | Soybean | plasma membrane | 38.38 | 18.05 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 32.77 | 16.39 |
| Solyc08g078780.2.1 | Tomato | plasma membrane | 37.82 | 15.07 |
| PGSC0003DMT400012245 | Potato | plasma membrane | 7.28 | 5.49 |
| PGSC0003DMT400012241 | Potato | cytosol, extracellular, plasma membrane | 3.64 | 3.25 |
| CDY58173 | Canola | plasma membrane | 2.52 | 2.23 |
Protein Annotations
| EnsemblPlants:CDY50133 | EnsemblPlantsGene:GSBRNA2T00095958001 | PANTHER:PTHR35307 | ProteinID:CDY50133 | ProteinID:CDY50133.1 | SEG:seg |
| UniParc:UPI0004EDF254 | UniProt:A0A078IM76 | MapMan:35.2 | : | : | : |
Description
BnaCnng18820DBnaCnng18820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IM76]
Coordinates
chrLK032883:-:78507..80784
Molecular Weight (calculated)
40378.6 Da
IEP (calculated)
7.427
GRAVY (calculated)
-0.413
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAEEETEH HQKKRSDGVR CTGWCLLASS SGEEELMDYM ARSNRDATNH LIQKGRKKQP QNLIDLLEAT DPISKGFEGI LEFDSDEVAS LAGSASGEPP
101: NCWALPLVTL TSIAASLPNI NPCLLKKLVK AVNEALVYVK KFEDVLDIEG ELANSRKAAE VVWLGVDLYH KWLKVDLQKL SKKQRARPQE VFKELEDIAK
201: KEFSESWEKN MLLKPSRWPI KILAANSMYR ISQTLSKKYE SRNIGTEDTL FREVERMVSD IVAGCFCNTA RVVGMQCLVT AVEVREASVR EAAMHLGRTE
301: KILEIVDRRC IPALSHHKVA KIDGWREFYK TNKCTPSSTT HPSTQCTTRQ LILTIEK
101: NCWALPLVTL TSIAASLPNI NPCLLKKLVK AVNEALVYVK KFEDVLDIEG ELANSRKAAE VVWLGVDLYH KWLKVDLQKL SKKQRARPQE VFKELEDIAK
201: KEFSESWEKN MLLKPSRWPI KILAANSMYR ISQTLSKKYE SRNIGTEDTL FREVERMVSD IVAGCFCNTA RVVGMQCLVT AVEVREASVR EAAMHLGRTE
301: KILEIVDRRC IPALSHHKVA KIDGWREFYK TNKCTPSSTT HPSTQCTTRQ LILTIEK
001: MANSMPSLGY MVTQDLLMNL TALGILVITD VVNICIQLGT GAIYVFPQEH ALVIILMLLM FMILSFSAIT VPATKRFLEL KYKKRYEFAL KQCPSYTERR
101: RGVPKLKEDL MKFWMMAHTS SPQFVMARSV TCTTTGFLCF LIAITLAEAM VRSYFLQPRS LGFCNGDSDY KWSTTLVLVS QTAAVAIGTV APASRWLKAV
201: NFRCPFRNKK SLKDELRVES YWVECLAEKK ERPLNFWMLH GRCSRKLAHD LNRLMLDICI ATQYGIVLAS KFLRFITVYC SSRILLCCFH FTFKSDSVAN
301: AESSGSNPST RQFVLHLEGE EEMVDYMARS NRVATDHLIQ KGRKKQPVNL IELLEATTFI SKGFEGIRDF DSDEVSSLAS GEPPNSWALP LVTLTSIAVA
401: LPNIKPCSLK KLVKAVNEAL VYVNKFEEVL DIEGELANSR KAAEVVWLGV DLYHKWLNVD LRKLSKQHSK TPQEVLKELV DIAQKEFTES WEKNRILCMK
501: HKPSHWPIKT QAANSMYRIS QTLLMKYESR NIETEETLLK DVEKMVSDIV SGCFCNTAQV IGMKCLVTAV EVREASVREA AMHLGRTEKI LEIVDRRCMP
601: ALSHHKVAKI DEWREFYRTN KSITFTHPSS QCTTRELIIN LE
101: RGVPKLKEDL MKFWMMAHTS SPQFVMARSV TCTTTGFLCF LIAITLAEAM VRSYFLQPRS LGFCNGDSDY KWSTTLVLVS QTAAVAIGTV APASRWLKAV
201: NFRCPFRNKK SLKDELRVES YWVECLAEKK ERPLNFWMLH GRCSRKLAHD LNRLMLDICI ATQYGIVLAS KFLRFITVYC SSRILLCCFH FTFKSDSVAN
301: AESSGSNPST RQFVLHLEGE EEMVDYMARS NRVATDHLIQ KGRKKQPVNL IELLEATTFI SKGFEGIRDF DSDEVSSLAS GEPPNSWALP LVTLTSIAVA
401: LPNIKPCSLK KLVKAVNEAL VYVNKFEEVL DIEGELANSR KAAEVVWLGV DLYHKWLNVD LRKLSKQHSK TPQEVLKELV DIAQKEFTES WEKNRILCMK
501: HKPSHWPIKT QAANSMYRIS QTLLMKYESR NIETEETLLK DVEKMVSDIV SGCFCNTAQV IGMKCLVTAV EVREASVREA AMHLGRTEKI LEIVDRRCMP
601: ALSHHKVAKI DEWREFYRTN KSITFTHPSS QCTTRELIIN LE
Arabidopsis Description
At4g17250/dl4660w [Source:UniProtKB/TrEMBL;Acc:Q93ZA8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.