Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012244 | Potato | plasma membrane | 78.91 | 94.14 |
| PGSC0003DMT400012242 | Potato | cytosol | 31.81 | 89.34 |
| Solyc08g078770.1.1 | Tomato | nucleus | 65.51 | 78.16 |
| VIT_02s0154g00410.t01 | Wine grape | plasma membrane | 42.41 | 50.4 |
| CDY58173 | Canola | plasma membrane | 21.88 | 48.64 |
| AT5G47580.1 | Thale cress | plasma membrane | 39.96 | 47.86 |
| Bra009567.1-P | Field mustard | plasma membrane | 35.94 | 46.07 |
| KRH04114 | Soybean | plasma membrane | 38.84 | 45.79 |
| CDY10425 | Canola | plasma membrane | 38.39 | 45.62 |
| KRH57388 | Soybean | plasma membrane | 38.5 | 45.45 |
| AT4G17250.1 | Thale cress | plasma membrane | 37.5 | 45.34 |
| Bra012672.1-P | Field mustard | endoplasmic reticulum, nucleus, plasma membrane | 37.28 | 45.01 |
| CDX90482 | Canola | plasma membrane | 37.28 | 44.95 |
| CDX70346 | Canola | plasma membrane | 36.05 | 44.49 |
| CDY09637 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 36.38 | 43.99 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 33.82 | 42.44 |
| Solyc08g078760.1.1 | Tomato | plasma membrane | 31.58 | 38.45 |
| CDY50133 | Canola | cytosol | 15.07 | 37.82 |
| Solyc06g060660.1.1 | Tomato | plasma membrane | 21.76 | 37.79 |
| CDY58172 | Canola | mitochondrion | 5.36 | 32.65 |
| Bra021060.1-P | Field mustard | mitochondrion | 5.36 | 32.65 |
| CDX73467 | Canola | extracellular | 15.96 | 18.94 |
Protein Annotations
| EnsemblPlants:Solyc08g078780.2.1 | EnsemblPlantsGene:Solyc08g078780.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000276AEF6 | UniProt:K4CNN7 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr8:+:62500621..62504212
Molecular Weight (calculated)
100590.0 Da
IEP (calculated)
8.402
GRAVY (calculated)
0.098
Length
896 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKIGCTIDG NLDDSKFSDP IPWIGVYVAA ASAVCALAMA IDVLHGLRRR KLWFPCNFFS LNATTLTLLA VATKLSVDLN TSMPRQQDQL TKLSSAALIC
101: TVTANFLPSL GLMDNTDLLM NIMALGIFVI TAIVNIGIQL ATGVIYVFSK EHIAIMFLML ILLLLLISSA LTIPTTKCYL DLKYNKRYKL ANKECNISYT
201: CKTQKLKDEL MRLWTMAYTS NPLFVAGRLA TCTASGGFCL LSTVIYAQAM LRSYFLHSSF SFCRGESEYK WSTTLILVTH TVAIGVGTIA PAFRWFIAIN
301: FHCPVKTNNA CKLMLFKVEN YWINILLKWK ECPLDFRICG RHGRKFAHKT KNKLLDFCIW MQILMVSLSK MVRIISTFSV SWLLISCQKV TGMLKCKNVV
401: SSHDIESQAS LMSDLSHYVL HLEGEEVLID LMMQSNCDVV DKWIGMGKKD QPKHLIQFLE KVKSSPGFRG VHEFDHAKIP SLDSEEPPNC WALPIVTLTS
501: IAIALPDIDF HLIKELIRSV YEGLMYIKLV EENLDSRKDL VYIRKAAELV WVEVDLCYKW LDVDLRKAAT EGQNPKGVLE GLAEKAKQRF VEFRKNDPNA
601: CLKDSPSKWP TNMLATNCMY RVCQTLLQSS DSKAFENSKT MFDRLSTMIA DITSACLTNL DRVISMQCHH GTIEERAAGV RSAILLLGKA ESFLHILRSQ
701: PLPSSAPDQL GNIDHWRSHS KEELIRCVNE GLMYIKVMEN NLDARKDLAS IRRAAELVWL DVDLCYKWLD VDLRKTTTAG KNPKDMLEGL SEKAKQRCIE
801: FRKKDLTVCP KGSPSKWPIN MLAANCVLSA ILLLGKAENI LEILRSQALS IPDQLAKIDH RCTLSKEGDL LSCSSSSTSN STPTSQISFG LYLAVD
101: TVTANFLPSL GLMDNTDLLM NIMALGIFVI TAIVNIGIQL ATGVIYVFSK EHIAIMFLML ILLLLLISSA LTIPTTKCYL DLKYNKRYKL ANKECNISYT
201: CKTQKLKDEL MRLWTMAYTS NPLFVAGRLA TCTASGGFCL LSTVIYAQAM LRSYFLHSSF SFCRGESEYK WSTTLILVTH TVAIGVGTIA PAFRWFIAIN
301: FHCPVKTNNA CKLMLFKVEN YWINILLKWK ECPLDFRICG RHGRKFAHKT KNKLLDFCIW MQILMVSLSK MVRIISTFSV SWLLISCQKV TGMLKCKNVV
401: SSHDIESQAS LMSDLSHYVL HLEGEEVLID LMMQSNCDVV DKWIGMGKKD QPKHLIQFLE KVKSSPGFRG VHEFDHAKIP SLDSEEPPNC WALPIVTLTS
501: IAIALPDIDF HLIKELIRSV YEGLMYIKLV EENLDSRKDL VYIRKAAELV WVEVDLCYKW LDVDLRKAAT EGQNPKGVLE GLAEKAKQRF VEFRKNDPNA
601: CLKDSPSKWP TNMLATNCMY RVCQTLLQSS DSKAFENSKT MFDRLSTMIA DITSACLTNL DRVISMQCHH GTIEERAAGV RSAILLLGKA ESFLHILRSQ
701: PLPSSAPDQL GNIDHWRSHS KEELIRCVNE GLMYIKVMEN NLDARKDLAS IRRAAELVWL DVDLCYKWLD VDLRKTTTAG KNPKDMLEGL SEKAKQRCIE
801: FRKKDLTVCP KGSPSKWPIN MLAANCVLSA ILLLGKAENI LEILRSQALS IPDQLAKIDH RCTLSKEGDL LSCSSSSTSN STPTSQISFG LYLAVD
001: MGILGCDAHG DLNDAEFSKP LPSIGIYVAV ASLICGLAMA ADLIHGFRHR KFWFPCKFFS LNATSLTFIA VGIKLSVDLN TSMPSRQDQL AKLSSTVFVC
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
Arabidopsis Description
AT5g47580/MNJ7_17 [Source:UniProtKB/TrEMBL;Acc:Q9FGJ9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.