Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009567.1-P | Field mustard | plasma membrane | 91.05 | 94.56 |
| CDY10425 | Canola | plasma membrane | 95.18 | 91.64 |
| AT5G47580.1 | Thale cress | plasma membrane | 79.2 | 76.87 |
| CDY09637 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 62.81 | 61.54 |
| CDX90482 | Canola | plasma membrane | 62.81 | 61.37 |
| CDY58173 | Canola | plasma membrane | 32.09 | 57.82 |
| CDY50133 | Canola | cytosol | 27.41 | 55.74 |
| CDY58172 | Canola | mitochondrion | 10.74 | 53.06 |
| VIT_02s0154g00410.t01 | Wine grape | plasma membrane | 46.56 | 44.83 |
| KRH04114 | Soybean | plasma membrane | 46.69 | 44.61 |
| PGSC0003DMT400012241 | Potato | cytosol, extracellular, plasma membrane | 24.52 | 44.5 |
| PGSC0003DMT400012245 | Potato | plasma membrane | 28.93 | 44.3 |
| KRH57388 | Soybean | plasma membrane | 46.28 | 44.27 |
| Solyc08g078770.1.1 | Tomato | nucleus | 45.32 | 43.81 |
| PGSC0003DMT400012244 | Potato | plasma membrane | 44.49 | 43.01 |
| CDX73467 | Canola | extracellular | 41.87 | 40.26 |
| PGSC0003DMT400012242 | Potato | cytosol | 17.49 | 39.81 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 38.29 | 38.94 |
| Solyc08g078780.2.1 | Tomato | plasma membrane | 44.49 | 36.05 |
Protein Annotations
| EnsemblPlants:CDX70346 | EnsemblPlantsGene:GSBRNA2T00136508001 | GO:A0A078C053 | PANTHER:PTHR35307 | ProteinID:CDX70346 | ProteinID:CDX70346.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF2B17 | MapMan:35.2 | : | : |
Description
BnaA10g26950D
Coordinates
chrLK031790:+:4201171..4203476
Molecular Weight (calculated)
81391.4 Da
IEP (calculated)
8.505
GRAVY (calculated)
0.073
Length
726 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTLGCDSHG VLNDAEFSKP MPSIGLYVAV ASLLCALAMA ADLLHGFLHR KFWFPCKFFS LNATSLTFIG VGIKLTVMGN SMPSLGSMDN KDLLMNLVAL
101: AILVVTDVVN ICIQLGTGAI YVFKEEHFMV VLLMILMLVI LSFSATTVPT TKRILETKYK KKYEMALKCP LATERTTVAK KIQQDLSKFW MMAHTSSPQF
201: VMARSVTCTA SGFFCLLSAV TLGEAVVRSY LLRPGTTTTL EFCRGDSDYK WSTSLVLVCQ GSAVAVGTVA PAIRWFTAVK FRCPIRGSRS YRDEFRVESY
301: WTQWFSEKKQ RPLPLSRLSI LKDRSCRKTA HDAKRWLLDV CIGVQYVIVF ASKIIRYVSV YCVSRILICL HLAFRATGRS TVSHVDSEMS GGGSRQELAS
401: FVLHLEGEDE LVDLMVRSNR EATDHWVKKG RKNQPVNLIE LLEATTKISK GFEGIREFDS SEVASLAPSG EPPNCWALPL VTMTAIALAL ANVKPKLLNA
501: VSEALDSVNK FECVLDTGGE LANLRKAAEV VWLGVDLYHK WFDVDLRKLS KQEKSPEETL RELAEVAKRE FSESWQMNLM VCMKHKPSHW PIKTLAANSM
601: YRICQTILLN YETRDYGTRE ALLRKLETTI SDIVSGCFCN VVQVVSVKCL VTAVEVREES VRGAALHLGR TEKILEIVER RRLPELRCDQ MKNIDEWRAF
701: YKMNSSECNS SKTVSSESNE VCITVD
101: AILVVTDVVN ICIQLGTGAI YVFKEEHFMV VLLMILMLVI LSFSATTVPT TKRILETKYK KKYEMALKCP LATERTTVAK KIQQDLSKFW MMAHTSSPQF
201: VMARSVTCTA SGFFCLLSAV TLGEAVVRSY LLRPGTTTTL EFCRGDSDYK WSTSLVLVCQ GSAVAVGTVA PAIRWFTAVK FRCPIRGSRS YRDEFRVESY
301: WTQWFSEKKQ RPLPLSRLSI LKDRSCRKTA HDAKRWLLDV CIGVQYVIVF ASKIIRYVSV YCVSRILICL HLAFRATGRS TVSHVDSEMS GGGSRQELAS
401: FVLHLEGEDE LVDLMVRSNR EATDHWVKKG RKNQPVNLIE LLEATTKISK GFEGIREFDS SEVASLAPSG EPPNCWALPL VTMTAIALAL ANVKPKLLNA
501: VSEALDSVNK FECVLDTGGE LANLRKAAEV VWLGVDLYHK WFDVDLRKLS KQEKSPEETL RELAEVAKRE FSESWQMNLM VCMKHKPSHW PIKTLAANSM
601: YRICQTILLN YETRDYGTRE ALLRKLETTI SDIVSGCFCN VVQVVSVKCL VTAVEVREES VRGAALHLGR TEKILEIVER RRLPELRCDQ MKNIDEWRAF
701: YKMNSSECNS SKTVSSESNE VCITVD
001: MGILGCDAHG DLNDAEFSKP LPSIGIYVAV ASLICGLAMA ADLIHGFRHR KFWFPCKFFS LNATSLTFIA VGIKLSVDLN TSMPSRQDQL AKLSSTVFVC
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
101: TVMGNSMPSL GIMDNNDLLM NLMALGILVI TDVVNICIQL GTGAIYVFSE EHFLVVLLML LMLMILCFSA TTVPTTKRIL ESKYNKRYDV AMKCPLATER
201: TVAKKIQQDL SKFWMMAHTS SPQFVMARSV TCTASGFFCL LSAITLGEAM VRSYFLRPRS LGFCHGDSDY KWSTSLVLVC QTTTVAIGTI APAIRWFTAV
301: NFRCPIRGKK YYRDEFRIES YWTHWFSEKK QHPLSLWILK ERRYRKTAHN AKRWILDVCI VIQYVIVFGS KIIRYISVSC VGKILLCCHF ALRTSNTITH
401: SESEKSDSNP SSRQDLASFV LHLEGEDPLV DVMVRSNREA TDHWIEKGRK KQPVNLIELL EATTPISKGF EGIAEFDSNK VASLAHGEPP NCWALPLVTL
501: TSIAVALPDI KPSSLKKLLN AVNEALEYVN KFECVLDTGG ESVNLRKAAE VVWLGVDLYH KWFDVDLRKL SKQQRNPEET LRELMEIAKK EFSESWQMNL
601: MVCMKHKPSH WPIKTLAANS MYRICQTILL TYESRDYGTG EALLRKLEST ISDIVSGCFC NVAQVISVKC LVSAVEVREE SVRGAALHLG RTEKILEILE
701: RRRLPKLRCD QMKNIDEWRA FYKINSCECD NNNKTVYPDS DELRLTVE
Arabidopsis Description
AT5g47580/MNJ7_17 [Source:UniProtKB/TrEMBL;Acc:Q9FGJ9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.