Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012241 | Potato | cytosol, extracellular, plasma membrane | 47.89 | 48.25 |
| PGSC0003DMT400012245 | Potato | plasma membrane | 47.39 | 40.3 |
| CDY09637 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 70.47 | 38.33 |
| CDX90482 | Canola | plasma membrane | 69.73 | 37.82 |
| CDY10425 | Canola | plasma membrane | 62.78 | 33.55 |
| CDX70346 | Canola | plasma membrane | 57.82 | 32.09 |
| VIT_02s0154g00410.t01 | Wine grape | plasma membrane | 52.85 | 28.25 |
| Solyc08g078770.1.1 | Tomato | nucleus | 49.38 | 26.5 |
| PGSC0003DMT400012244 | Potato | plasma membrane | 49.13 | 26.36 |
| KRH57388 | Soybean | plasma membrane | 48.88 | 25.96 |
| KRH04114 | Soybean | plasma membrane | 47.89 | 25.39 |
| GSMUA_Achr4P04960_001 | Banana | plasma membrane | 41.19 | 23.25 |
| Solyc08g078780.2.1 | Tomato | plasma membrane | 48.64 | 21.88 |
| CDY50133 | Canola | cytosol | 2.23 | 2.52 |
| CDX73467 | Canola | extracellular | 4.22 | 2.25 |
| PGSC0003DMT400012242 | Potato | cytosol | 0.5 | 0.63 |
| CDY58172 | Canola | mitochondrion | 0.0 | 0.0 |
| Bra021060.1-P | Field mustard | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY58173 | EnsemblPlantsGene:GSBRNA2T00023190001 | GO:A0A078J5S2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR35307 | ProteinID:CDY58173 | ProteinID:CDY58173.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EEF7FC |
| UniProt:A0A078J5S2 | MapMan:35.2 | : | : | : | : |
Description
BnaA08g30280DBnaA08g30280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5S2]
Coordinates
chrLK033642:-:41692..43463
Molecular Weight (calculated)
44816.9 Da
IEP (calculated)
8.338
GRAVY (calculated)
0.257
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAEEETEH HQKKAMGCDG QGKLSDSEFS KPLPWIGVYV AAASLICGLA MFADLLRGFR NRRFWFPCKS FSLNATTLTF LAVCVKLSVD LNTCMPSRQD
101: QLSKLSSNVF VCTVMANSMP SLGFMVTQDL LMNLVALGIL VVTDVVNICI QLGTGAIYVF PQEHALVIVL TLLMFVILTF SAITVPATKR FLELKYKKSY
201: ELALKQCPLY QTERRGGFCE LKEDLMKFWM MAHTCSPQFV MARSVTCTTS GFLCFLSAVT LSEAILRSYF IQPSTLGFCG GDSDYKWSTT LVLLSQAVAV
301: AIGTIAPASR WFTAVNLQCS SGASKSLRDE LRVESYWVES LSEKKEHPLN FWMLHGRRSR KLAHDVNRCI LDLCIAIQYG IVFASKLLRG GGAATESKTT
401: RSF
101: QLSKLSSNVF VCTVMANSMP SLGFMVTQDL LMNLVALGIL VVTDVVNICI QLGTGAIYVF PQEHALVIVL TLLMFVILTF SAITVPATKR FLELKYKKSY
201: ELALKQCPLY QTERRGGFCE LKEDLMKFWM MAHTCSPQFV MARSVTCTTS GFLCFLSAVT LSEAILRSYF IQPSTLGFCG GDSDYKWSTT LVLLSQAVAV
301: AIGTIAPASR WFTAVNLQCS SGASKSLRDE LRVESYWVES LSEKKEHPLN FWMLHGRRSR KLAHDVNRCI LDLCIAIQYG IVFASKLLRG GGAATESKTT
401: RSF
001: MGCDSHGNLS DTEFSKPLPS IGVYVAAASL ICGVAMFSDL LHGFRHRKFW FPCKFFSLNA TTLTFISVCV KLSLDLNTSM PSRQDQLAKL SSSVFVCTVM
101: ANSMPSLGYM VTQDLLMNLT ALGILVITDV VNICIQLGTG AIYVFPQEHA LVIILMLLMF MILSFSAITV PATKRFLELK YKKRYEFALK QCPSYTERRR
201: GVPKLKEDLM KFWMMAHTSS PQFVMARSVT CTTTGFLCFL IAITLAEAMV RSYFLQPRSL GFCNGDSDYK WSTTLVLVSQ TAAVAIGTVA PASRWLKAVN
301: FRCPFRNKKS LKDELRVESY WVECLAEKKE RPLNFWMLHG RCSRKLAHDL NRLMLDICIA TQYGIVLASK FLRFITVYCS SRILLCCFHF TFKSDSVANA
401: ESSGSNPSTR QFVLHLEGEE EMVDYMARSN RVATDHLIQK GRKKQPVNLI ELLEATTFIS KGFEGIRDFD SDEVSSLASG EPPNSWALPL VTLTSIAVAL
501: PNIKPCSLKK LVKAVNEALV YVNKFEEVLD IEGELANSRK AAEVVWLGVD LYHKWLNVDL RKLSKQHSKT PQEVLKELVD IAQKEFTESW EKNRILCMKH
601: KPSHWPIKTQ AANSMYRISQ TLLMKYESRN IETEETLLKD VEKMVSDIVS GCFCNTAQVI GMKCLVTAVE VREASVREAA MHLGRTEKIL EIVDRRCMPA
701: LSHHKVAKID EWREFYRTNK SITFTHPSSQ CTTRELIINL E
101: ANSMPSLGYM VTQDLLMNLT ALGILVITDV VNICIQLGTG AIYVFPQEHA LVIILMLLMF MILSFSAITV PATKRFLELK YKKRYEFALK QCPSYTERRR
201: GVPKLKEDLM KFWMMAHTSS PQFVMARSVT CTTTGFLCFL IAITLAEAMV RSYFLQPRSL GFCNGDSDYK WSTTLVLVSQ TAAVAIGTVA PASRWLKAVN
301: FRCPFRNKKS LKDELRVESY WVECLAEKKE RPLNFWMLHG RCSRKLAHDL NRLMLDICIA TQYGIVLASK FLRFITVYCS SRILLCCFHF TFKSDSVANA
401: ESSGSNPSTR QFVLHLEGEE EMVDYMARSN RVATDHLIQK GRKKQPVNLI ELLEATTFIS KGFEGIRDFD SDEVSSLASG EPPNSWALPL VTLTSIAVAL
501: PNIKPCSLKK LVKAVNEALV YVNKFEEVLD IEGELANSRK AAEVVWLGVD LYHKWLNVDL RKLSKQHSKT PQEVLKELVD IAQKEFTESW EKNRILCMKH
601: KPSHWPIKTQ AANSMYRISQ TLLMKYESRN IETEETLLKD VEKMVSDIVS GCFCNTAQVI GMKCLVTAVE VREASVREAA MHLGRTEKIL EIVDRRCMPA
701: LSHHKVAKID EWREFYRTNK SITFTHPSSQ CTTRELIINL E
Arabidopsis Description
At4g17250/dl4660w [Source:UniProtKB/TrEMBL;Acc:Q93ZA8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.