CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01406
EES19859

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48530.1	EES01406	AT3G29160.1	10417704
AT3G48530.1	EES19859	AT3G29160.1	10417704

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004006_P001	Maize	cytosol, extracellular	97.87	97.87
Os04t0382300-01	Rice	cytoskeleton, cytosol, peroxisome	90.31	89.88
TraesCS2B01G299000.1	Wheat	cytosol	89.6	89.18
TraesCS2A01G281700.1	Wheat	cytosol	89.6	89.18
TraesCS2D01G280600.1	Wheat	cytosol	88.89	88.47
HORVU2Hr1G069060.5	Barley	cytosol	88.18	80.56
KRH63760	Soybean	cytosol	60.76	62.53
VIT_17s0000g01460.t01	Wine grape	peroxisome	62.65	61.63
Solyc03g111310.2.1	Tomato	unclear	61.94	61.5
PGSC0003DMT400039410	Potato	peroxisome	61.47	61.03
Bra018050.1-P	Field mustard	cytosol	59.34	59.48
CDY08080	Canola	cytosol	58.87	59.14
KRH54191	Soybean	nucleus	60.52	58.72
AT3G48530.1	Thale cress	cytosol	58.39	58.25
CDY59154	Canola	cytosol	58.39	57.98
CDX68465	Canola	cytosol	57.92	57.78
KRH57227	Soybean	cytosol	59.1	57.34
KRH03956	Soybean	peroxisome	59.34	56.53
EES04118	Sorghum	cytosol	58.16	56.04
CDY70744	Canola	cytosol	49.65	55.7
Bra029902.1-P	Field mustard	mitochondrion	57.92	53.73
GSMUA_Achr3P19540_001	Banana	nucleus	69.74	34.26
EES03176	Sorghum	cytosol, peroxisome, plasma membrane	31.21	29.27
KXG32947	Sorghum	cytosol	23.4	23.97

Protein Annotations

MapMan:18.4.5.1.3	MapMan:27.3.1.3	Gene3D:3.10.580.10	UniProt:A0A1B6PK61	InterPro:CBS_dom	GO:GO:0003674
GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009505	GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0030312
InterPro:IPR000644	EnsemblPlants:KXG26065	ProteinID:KXG26065	ProteinID:KXG26065.1	PFAM:PF00571	PFscan:PS51371
PANTHER:PTHR13780	PANTHER:PTHR13780:SF36	SMART:SM00116	EnsemblPlantsGene:SORBI_3006G047000	SUPFAM:SSF54631	UniParc:UPI0001C80552
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:32520971..32524834

Molecular Weight (calculated)

46460.5 Da

IEP (calculated)

5.104

GRAVY (calculated)

-0.118

Length

423 amino acids

Sequence
(BLAST)

001: MESPRSPEAE IGHRVEDLWE VAEPQLSPSE KLNSCFEDIP VASFPRTHPS QVIEIPSDAS LAETVEILSK NKILSAPIRN VEAPEDASWM DKYIGIVEFA
101: GIAMWLLSQS DAAVNGTVGS GAGSPVSNLV SRLGSFTFSR TSSGRVETAT DSESDEAASV GGSFFETLTS SEFYKNTKVG DISGSFRWAP FLALQTSDTF
201: LTMLLLLSKY RMKSLPVVEV GGDKIENIIT QSSVVHMLAE CVGLSWFESW GTKKLSELGL PIMKPSKLVK VNEDQPVLKA FQLMREKGVG GLPVMDTSGA
301: KAIGNISIRD VQYLLTAPKI YKEHRSITTK DFLSAVRHHL QEQCEASPLL HDVITCKKDD TIKDIILKLD SEKIHRIYVV DDKGNTEGVI TLRDIISKLV
401: HEPRHYFGDF FDGVVPLPAN STV

Best Arabidopsis Sequence Match ( AT3G48530.1 )
(BLAST)

001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV

Arabidopsis Description

KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.