Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G081310.4 | |
| HORVU3Hr1G069190.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G48530.1 | HORVU1Hr1G081310.4 | AT3G29160.1 | 10417704 |
| AT3G48530.1 | HORVU3Hr1G069190.1 | AT3G29160.1 | 10417704 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G280600.1 | Wheat | cytosol | 88.55 | 96.47 |
| TraesCS2B01G299000.1 | Wheat | cytosol | 88.34 | 96.24 |
| TraesCS2A01G281700.1 | Wheat | cytosol | 88.12 | 96.0 |
| Os04t0382300-01 | Rice | cytoskeleton, cytosol, peroxisome | 81.43 | 88.71 |
| KXG26065 | Sorghum | cytosol | 80.56 | 88.18 |
| Zm00001d004006_P001 | Maize | cytosol, extracellular | 79.7 | 87.23 |
| Solyc03g111310.2.1 | Tomato | unclear | 57.45 | 62.44 |
| PGSC0003DMT400039410 | Potato | peroxisome | 57.02 | 61.97 |
| VIT_17s0000g01460.t01 | Wine grape | peroxisome | 55.72 | 60.0 |
| KRH63760 | Soybean | cytosol | 52.92 | 59.61 |
| Bra018050.1-P | Field mustard | cytosol | 53.13 | 58.29 |
| CDY08080 | Canola | cytosol | 52.7 | 57.96 |
| AT3G48530.1 | Thale cress | cytosol | 52.27 | 57.08 |
| CDX68465 | Canola | cytosol | 51.84 | 56.6 |
| CDY59154 | Canola | cytosol | 52.05 | 56.57 |
| KRH03956 | Soybean | peroxisome | 54.21 | 56.53 |
| KRH54191 | Soybean | nucleus | 52.7 | 55.96 |
| KRH57227 | Soybean | cytosol | 52.7 | 55.96 |
| CDY70744 | Canola | cytosol | 44.49 | 54.64 |
| HORVU3Hr1G094560.3 | Barley | cytosol, mitochondrion, peroxisome | 52.05 | 54.52 |
| Bra029902.1-P | Field mustard | mitochondrion | 52.27 | 53.07 |
| GSMUA_Achr3P19540_001 | Banana | nucleus | 63.28 | 34.03 |
| HORVU2Hr1G032570.2 | Barley | cytosol, plasma membrane | 28.51 | 23.83 |
Protein Annotations
| MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | Gene3D:3.10.580.10 | UniProt:A0A287IBF5 | InterPro:CBS_dom | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009505 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | GO:GO:0030312 |
| EnsemblPlantsGene:HORVU2Hr1G069060 | EnsemblPlants:HORVU2Hr1G069060.5 | InterPro:IPR000644 | PFAM:PF00571 | PFscan:PS51371 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF36 | SMART:SM00116 | SUPFAM:SSF54631 | UniParc:UPI000B47C169 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:-:486457387..486462970
Molecular Weight (calculated)
50906.6 Da
IEP (calculated)
5.474
GRAVY (calculated)
-0.186
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: QFGLEFTSCI SPRVGVAATR NPQAEEEGSR SGYLQRCWEN PGGGSSPEAE IGHRVEDLWE VAQPQLSPSE KLNSCFEDIP VAAFPRNHPS QVIEIPSDAS
101: LADTVETLSK NKILSAPIRN VDAPEDATWI DKYIGIVEFA GIAMWLLHQS DASGNGTAGS AVGSPVANLA ARLGSFTFRR TSSGRVETTT DSESDEAASV
201: GGSFFENLTS SEFYKNTKVG DISGSFRWAP FLALQTSDTF LTMLLLLSKY RMKSLPVVDM GGNQIENVIT QSCVVHMLAE CVGLPWFESW GTKKLCELGL
301: PLMKPYKLVK VNEDQPVLKA FQLMREKGVG GVPVMDTNGT KAIGNISIRD VQYLLSAPKI YKQYRTISAK DFLTAVRHHL QEQHEASPLL HDVITCKRDD
401: VIKDIILKLD STKIHRIYVV DDKGDTEGVI TLRDIISKLV HEPRHYFGDF FDGVVPLPAN STV
101: LADTVETLSK NKILSAPIRN VDAPEDATWI DKYIGIVEFA GIAMWLLHQS DASGNGTAGS AVGSPVANLA ARLGSFTFRR TSSGRVETTT DSESDEAASV
201: GGSFFENLTS SEFYKNTKVG DISGSFRWAP FLALQTSDTF LTMLLLLSKY RMKSLPVVDM GGNQIENVIT QSCVVHMLAE CVGLPWFESW GTKKLCELGL
301: PLMKPYKLVK VNEDQPVLKA FQLMREKGVG GVPVMDTNGT KAIGNISIRD VQYLLSAPKI YKQYRTISAK DFLTAVRHHL QEQHEASPLL HDVITCKRDD
401: VIKDIILKLD STKIHRIYVV DDKGDTEGVI TLRDIISKLV HEPRHYFGDF FDGVVPLPAN STV
001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
Arabidopsis Description
KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.