Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G185000.1 | Wheat | cytosol, peroxisome, plasma membrane | 77.44 | 94.7 |
| TraesCS2B01G203900.2 | Wheat | cytosol, peroxisome, plasma membrane | 77.44 | 94.7 |
| TraesCS2A01G177000.1 | Wheat | cytosol, peroxisome, plasma membrane | 77.26 | 94.48 |
| EES03176 | Sorghum | cytosol, peroxisome, plasma membrane | 68.95 | 84.7 |
| Zm00001d044315_P004 | Maize | cytosol | 68.23 | 83.81 |
| Os01t0586600-01 | Rice | cytosol | 30.32 | 76.02 |
| GSMUA_Achr7P23930_001 | Banana | cytosol | 52.89 | 66.29 |
| PGSC0003DMT400002254 | Potato | cytosol, endoplasmic reticulum, peroxisome | 49.46 | 61.71 |
| KRH74794 | Soybean | cytosol | 49.28 | 61.63 |
| Bra013236.1-P | Field mustard | mitochondrion | 24.01 | 60.73 |
| VIT_01s0026g01740.t01 | Wine grape | cytosol | 48.56 | 60.59 |
| Solyc01g010700.2.1 | Tomato | nucleus | 48.38 | 60.36 |
| Bra007883.1-P | Field mustard | cytosol | 47.65 | 59.19 |
| CDY71798 | Canola | cytosol | 47.47 | 58.97 |
| CDY56064 | Canola | cytosol | 47.11 | 58.52 |
| KRH69332 | Soybean | endoplasmic reticulum, vacuole | 48.74 | 55.9 |
| AT1G69800.2 | Thale cress | mitochondrion | 48.01 | 55.88 |
| CDY11653 | Canola | cytosol | 42.06 | 55.74 |
| CDY38762 | Canola | nucleus | 42.42 | 30.13 |
| HORVU3Hr1G094560.3 | Barley | cytosol, mitochondrion, peroxisome | 23.1 | 28.96 |
| HORVU2Hr1G069060.5 | Barley | cytosol | 23.83 | 28.51 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G032570.2 | EnsemblPlantsGene:HORVU2Hr1G032570 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF47 | PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 |
| UniParc:UPI000B479ED8 | UniProt:A0A287HLX8 | MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:127027796..127031300
Molecular Weight (calculated)
58257.8 Da
IEP (calculated)
4.645
GRAVY (calculated)
0.195
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: SKGGGGWVTG LWCGDVAPCR VHVPVCPWQA STAPSLAVFD SSSTAPSPAP WIGSQENQTI DPPRPALPIH SASPASSPAA ALHLEAASLL SPGAPASRSQ
101: EMARPEENAK FPSCDAYFDT IQSKKKLPLA LQESLTAAFA QIPVASFPDV PSGRVTEIPG ETSVLDAVRI LSEHNIRAAP VLNPEPGAPA DWQGRYLGII
201: EYSAIILWVL DNADLVAVAL SAGSATAAGV GIGAVGAVGV AALGATGPAA VAGLTAAAVG AAVAGGLTAE KGVARDGVTA ADHLGEDFYK VLLQQEPFKS
301: TTVRTIVESY PWSPFVPVTL DSSMLAVLLL LSKYRLRNVP VIEPDKPVIK NFITQTGVVK GLQQCKGRDW FDYISALPLS DLGLPFMSLD EVITVNSDDL
401: ILEAFKCMKD NKIGGVPVVE GPNRKLVGSV SIRDIRFLLL RPDLFSDFRH LTVLEFMKAL GSTLTDSGGD VLVKPPLTCA PDASMGSVID SIGSRITHRI
501: YVVDGDFEVV GVVTLRDVIS CFIHEPPGFC DSYLVSAMEK LEDKADVDSS VENS
101: EMARPEENAK FPSCDAYFDT IQSKKKLPLA LQESLTAAFA QIPVASFPDV PSGRVTEIPG ETSVLDAVRI LSEHNIRAAP VLNPEPGAPA DWQGRYLGII
201: EYSAIILWVL DNADLVAVAL SAGSATAAGV GIGAVGAVGV AALGATGPAA VAGLTAAAVG AAVAGGLTAE KGVARDGVTA ADHLGEDFYK VLLQQEPFKS
301: TTVRTIVESY PWSPFVPVTL DSSMLAVLLL LSKYRLRNVP VIEPDKPVIK NFITQTGVVK GLQQCKGRDW FDYISALPLS DLGLPFMSLD EVITVNSDDL
401: ILEAFKCMKD NKIGGVPVVE GPNRKLVGSV SIRDIRFLLL RPDLFSDFRH LTVLEFMKAL GSTLTDSGGD VLVKPPLTCA PDASMGSVID SIGSRITHRI
501: YVVDGDFEVV GVVTLRDVIS CFIHEPPGFC DSYLVSAMEK LEDKADVDSS VENS
001: MHFIRTRVTA RKAKPKICLK FFKLSRYQDM AGSEAVEDKE IKSAVSSCEA YFEKVQSRKN LPKSLQETLN SAFAGIPVSS FPQVPGGRVI EIQAETPVSE
101: AVKILSDSKI LSAPVINTDH ESSLDWRERY LGIIDYSSII LWVLESAELA AIALSATSAT AAGVGAGAVG ALGVAALGMT GPVAAAGLAA AAVGAAVAGG
201: VAAERGIGKD APTAADKLGK DFYEVILQEE PFKSTTVRTI LKSFRWAPFL PVSTESSMLS VMLLLSKYRL RNVPVIKTGE PDIKNYVTQS AVVHGLEGCK
301: GRDWFDHISA LPISDLGLPF MSPNEVISIE SEELILEAFK RMRDNNIGGL PVVEGLNKKI VGNISMRDIR YLLLQPEVFS NFRQLTVKSF ATKIATAGEE
401: YGLAIPAITC RPDSTLGSVI NSLASRSVHR VYVAAGDENE LYGVITLRDV ISCFVSEPPN YFENCLGFSV KEMLNR
101: AVKILSDSKI LSAPVINTDH ESSLDWRERY LGIIDYSSII LWVLESAELA AIALSATSAT AAGVGAGAVG ALGVAALGMT GPVAAAGLAA AAVGAAVAGG
201: VAAERGIGKD APTAADKLGK DFYEVILQEE PFKSTTVRTI LKSFRWAPFL PVSTESSMLS VMLLLSKYRL RNVPVIKTGE PDIKNYVTQS AVVHGLEGCK
301: GRDWFDHISA LPISDLGLPF MSPNEVISIE SEELILEAFK RMRDNNIGGL PVVEGLNKKI VGNISMRDIR YLLLQPEVFS NFRQLTVKSF ATKIATAGEE
401: YGLAIPAITC RPDSTLGSVI NSLASRSVHR VYVAAGDENE LYGVITLRDV ISCFVSEPPN YFENCLGFSV KEMLNR
Arabidopsis Description
Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.