Factsheet for GSMUA_Achr7P23930_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g01740.t01	Wine grape	cytosol	68.33	68.02
Zm00001d044315_P004	Maize	cytosol	67.65	66.3
EES03176	Sorghum	cytosol, peroxisome, plasma membrane	66.74	65.41
TraesCS2A01G177000.1	Wheat	cytosol, peroxisome, plasma membrane	66.97	65.34
KRH74794	Soybean	cytosol	65.38	65.24
TraesCS2D01G185000.1	Wheat	cytosol, peroxisome, plasma membrane	66.74	65.12
PGSC0003DMT400002254	Potato	cytosol, endoplasmic reticulum, peroxisome	65.38	65.09
TraesCS2B01G203900.2	Wheat	cytosol, peroxisome, plasma membrane	66.52	64.9
Os01t0586600-01	Rice	cytosol	32.35	64.71
Solyc01g010700.2.1	Tomato	nucleus	64.93	64.64
Bra013236.1-P	Field mustard	mitochondrion	31.45	63.47
Bra007883.1-P	Field mustard	cytosol	63.8	63.23
CDY71798	Canola	cytosol	63.8	63.23
CDY56064	Canola	cytosol	62.9	62.33
KRH69332	Soybean	endoplasmic reticulum, vacuole	63.35	57.97
CDY11653	Canola	cytosol	54.75	57.89
AT1G69800.2	Thale cress	mitochondrion	62.22	57.77
HORVU2Hr1G032570.2	Barley	cytosol, plasma membrane	66.29	52.89
CDY38762	Canola	nucleus	57.01	32.31
GSMUA_AchrUn_...	Banana	extracellular, vacuole	29.86	30.28
GSMUA_Achr2P09000_001	Banana	cytoskeleton, cytosol, peroxisome	21.27	23.44
GSMUA_Achr3P19540_001	Banana	nucleus	31.9	16.38

Protein Annotations

EnsemblPlants:GSMUA_Achr7P23930_001	EnsemblPlants:GSMUA_Achr7T23930_001	EnsemblPlantsGene:GSMUA_Achr7G23930_001	Gene3D:3.10.580.10	GO:GO:0003674	GO:GO:0003824
InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780	PANTHER:PTHR13780:SF47	PFAM:PF00571	PFscan:PS51371
SEG:seg	SMART:SM00116	SUPFAM:SSF54631	UniParc:UPI000296F6D4	UniProt:M0TK79	MapMan:18.4.5.1.3
MapMan:27.3.1.3	:	:	:	:	:

Description

Putative SNF1-related protein kinase regulatory subunit gamma 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G23930_001]

Coordinates

chr7:+:25991639..25995935

Molecular Weight (calculated)

47519.4 Da

IEP (calculated)

4.876

GRAVY (calculated)

0.209

Length

442 amino acids

Sequence
(BLAST)

001: MAPTEKSSRL PNCDAYFEAI QSKKKLPYAL QECLTSAFAQ IPVSSFPEVP GGKVIEIPGD MPIVDAVRIL SEHNIMTAPV THSNGENSID WRERYLGIID
101: YAAIILWVLE NAELAAIALS ASSATTAGVG AGAVGALGAA VLGATGPAAV AGLTIAAVGA AIAGGVATEK GMGKDAPSAV DDLGEDFYKT LLEEEPFKST
201: TVKSIMESYR WAPFLPVGLD SSMLTVLLLL SKYRLRSVPV VESGKPHVTN FITQTAVVQG LQQCSGRDWF DCIAAYPLSD LGLPFMSSEE VISIKSDDLI
301: LEAFKCMKDN RIGGLPVVEG PNHKIVGRVS IRDIRFLLLK PGLFSNFRQL TVMDFLRTLD LVSQDSRNHA VAPVTCAPDA CLGSIIDSLA SKSVHRIYVV
401: EGDEKEVVGV ITLRDVISCF IYEPPYHFDT YFGCAVKELQ SR

Best Arabidopsis Sequence Match ( AT1G69800.2 )
(BLAST)

001: MHFIRTRVTA RKAKPKICLK FFKLSRYQDM AGSEAVEDKE IKSAVSSCEA YFEKVQSRKN LPKSLQETLN SAFAGIPVSS FPQVPGGRVI EIQAETPVSE
101: AVKILSDSKI LSAPVINTDH ESSLDWRERY LGIIDYSSII LWVLESAELA AIALSATSAT AAGVGAGAVG ALGVAALGMT GPVAAAGLAA AAVGAAVAGG
201: VAAERGIGKD APTAADKLGK DFYEVILQEE PFKSTTVRTI LKSFRWAPFL PVSTESSMLS VMLLLSKYRL RNVPVIKTGE PDIKNYVTQS AVVHGLEGCK
301: GRDWFDHISA LPISDLGLPF MSPNEVISIE SEELILEAFK RMRDNNIGGL PVVEGLNKKI VGNISMRDIR YLLLQPEVFS NFRQLTVKSF ATKIATAGEE
401: YGLAIPAITC RPDSTLGSVI NSLASRSVHR VYVAAGDENE LYGVITLRDV ISCFVSEPPN YFENCLGFSV KEMLNR

Arabidopsis Description

Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.