CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71798	Canola	cytosol	97.31	97.31
CDY11653	Canola	cytosol	77.58	82.78
AT1G69800.2	Thale cress	mitochondrion	87.22	81.72
VIT_01s0026g01740.t01	Wine grape	cytosol	66.14	66.44
PGSC0003DMT400002254	Potato	cytosol, endoplasmic reticulum, peroxisome	64.35	64.64
Solyc01g010700.2.1	Tomato	nucleus	63.9	64.19
KRH74794	Soybean	cytosol	63.23	63.66
GSMUA_Achr7P23930_001	Banana	cytosol	62.33	62.9
Os01t0586600-01	Rice	cytosol	30.27	61.09
KRH69332	Soybean	endoplasmic reticulum, vacuole	62.56	57.76
TraesCS2D01G185000.1	Wheat	cytosol, peroxisome, plasma membrane	58.52	57.62
TraesCS2B01G203900.2	Wheat	cytosol, peroxisome, plasma membrane	58.3	57.4
TraesCS2A01G177000.1	Wheat	cytosol, peroxisome, plasma membrane	58.3	57.4
Zm00001d044315_P004	Maize	cytosol	57.85	57.21
EES03176	Sorghum	cytosol, peroxisome, plasma membrane	57.62	56.98
HORVU2Hr1G032570.2	Barley	cytosol, plasma membrane	58.52	47.11
CDY38762	Canola	nucleus	78.48	44.87
CDY70744	Canola	cytosol	28.7	33.95
CDY59154	Canola	cytosol	32.29	33.8
CDY08080	Canola	cytosol	31.84	33.73
CDX68465	Canola	cytosol	32.06	33.73

Protein Annotations

EnsemblPlants:CDY56064	EnsemblPlantsGene:GSBRNA2T00017729001	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780
PANTHER:PTHR13780:SF47	PFAM:PF00571	PFscan:PS51371	ProteinID:CDY56064	ProteinID:CDY56064.1	SEG:seg
SMART:SM00116	SUPFAM:SSF54631	UniParc:UPI0004EEE986	UniProt:A0A078J1Y5	MapMan:18.4.5.1.3	MapMan:27.3.1.3

Description

BnaCnng29820DBnaCnng29820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1Y5]

Coordinates

chrLK033452:-:56827..58901

Molecular Weight (calculated)

47899.6 Da

IEP (calculated)

6.383

GRAVY (calculated)

0.103

Length

446 amino acids

Sequence
(BLAST)

001: MAGSESLDKE ISSAVSSCEA YFEKVQSRKN LPKSLQETLN SAFAGIPVSS FPRVPGGRVI EIPAQTSVSE AVRILSDSKI LSAPVINKDH KGSLDWRERY
101: LGIIDYSSII LWVLESADFA AIALSATSAT AAGVGAGAVG ALGVAALGAT GPVAAAGLAA AAVGAAVAGG VAADRGIGKD APTAVDRLGK DFYQVILREE
201: PFKSTTVRTI LKSFRYAPFV PVSTESSMLS VLLLLSKYRL RNVPVIKPGE PDIKNYITQS AVVYGLEDCK GRDWFDHISS LPISELGLPF MSPKEVISID
301: SDEHILEAFK RMRDNNIGGL PVVDGTNKKI VGNISMRDIR YLLLQPEVFS NFRHLTVRNF TTKIATAGEE YGLAIPAITC RPDSTLGSVI NSLASMSVHR
401: VYVGEGDENE LYGVITLRDV ISCFVSEPPN YFENCLGFSV KEMLKR

Best Arabidopsis Sequence Match ( AT1G69800.1 )
(BLAST)

001: MAGSEAVEDK EIKSAVSSCE AYFEKVQSRK NLPKSLQETL NSAFAGIPVS SFPQVPGGRV IEIQAETPVS EAVKILSDSK ILSAPVINTD HESSLDWRER
101: YLGIIDYSSI ILWVLESAEL AAIALSATSA TAAGVGAGAV GALGVAALGM TGPVAAAGLA AAAVGAAVAG GVAAERGIGK DAPTAADKLG KDFYEVILQE
201: EPFKSTTVRT ILKSFRWAPF LPVSTESSML SVMLLLSKYR LRNVPVIKTG EPDIKNYVTQ SAVVHGLEGC KGRDWFDHIS ALPISDLGLP FMSPNEVISI
301: ESEELILEAF KRMRDNNIGG LPVVEGLNKK IVGNISMRDI RYLLLQPEVF SNFRQLTVKS FATKIATAGE EYGLAIPAIT CRPDSTLGSV INSLASRSVH
401: RVYVAAGDEN ELYGVITLRD VISCFVSEPP NYFENCLGFS VKEMLNR

Arabidopsis Description

Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.