Factsheet for AT1G69800.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013236.1-P	Field mustard	mitochondrion	42.23	91.78
CDY71798	Canola	cytosol	83.82	89.46
Bra007883.1-P	Field mustard	cytosol	83.19	88.79
CDY11653	Canola	cytosol	76.89	87.56
CDY56064	Canola	cytosol	81.72	87.22
PGSC0003DMT400002254	Potato	cytosol, endoplasmic reticulum, peroxisome	62.6	67.12
KRH74794	Soybean	cytosol	61.55	66.14
VIT_01s0026g01740.t01	Wine grape	cytosol	61.55	65.99
Solyc01g010700.2.1	Tomato	nucleus	61.55	65.99
GSMUA_Achr7P23930_001	Banana	cytosol	57.77	62.22
KRH69332	Soybean	endoplasmic reticulum, vacuole	61.76	60.87
Zm00001d044315_P004	Maize	cytosol	56.3	59.42
EES03176	Sorghum	cytosol, peroxisome, plasma membrane	55.88	58.98
TraesCS2A01G177000.1	Wheat	cytosol, peroxisome, plasma membrane	55.88	58.72
TraesCS2D01G185000.1	Wheat	cytosol, peroxisome, plasma membrane	55.88	58.72
TraesCS2B01G203900.2	Wheat	cytosol, peroxisome, plasma membrane	55.67	58.5
Os01t0586600-01	Rice	cytosol	27.1	58.37
HORVU2Hr1G032570.2	Barley	cytosol, plasma membrane	55.88	48.01
CDY38762	Canola	nucleus	75.63	46.15
AT3G48530.1	Thale cress	cytosol	29.83	33.49

Protein Annotations

MapMan:18.4.5.1.3	MapMan:27.3.1.3	Gene3D:3.10.580.10	EntrezGene:843316	ProteinID:AAG52563.1	ProteinID:AEE34976.1
ProteinID:AEE34977.1	EMBL:AK317462	ArrayExpress:AT1G69800	EnsemblPlantsGene:AT1G69800	RefSeq:AT1G69800	TAIR:AT1G69800
RefSeq:AT1G69800-TAIR-G	EnsemblPlants:AT1G69800.2	TAIR:AT1G69800.2	Unigene:At.18237	EMBL:BT033072	InterPro:CBS_dom
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	InterPro:IPR000644	RefSeq:NP_001077801.1	RefSeq:NP_564975.2
ProteinID:OAP13548.1	PFAM:PF00571	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS51371
PANTHER:PTHR13780	PANTHER:PTHR13780:SF47	SMART:SM00116	SUPFAM:SSF54631	UniParc:UPI000150569A	SEG:seg

Description

Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]

Coordinates

chr1:-:26274230..26276329

Molecular Weight (calculated)

51386.1 Da

IEP (calculated)

7.013

GRAVY (calculated)

0.106

Length

476 amino acids

Sequence
(BLAST)

001: MHFIRTRVTA RKAKPKICLK FFKLSRYQDM AGSEAVEDKE IKSAVSSCEA YFEKVQSRKN LPKSLQETLN SAFAGIPVSS FPQVPGGRVI EIQAETPVSE
101: AVKILSDSKI LSAPVINTDH ESSLDWRERY LGIIDYSSII LWVLESAELA AIALSATSAT AAGVGAGAVG ALGVAALGMT GPVAAAGLAA AAVGAAVAGG
201: VAAERGIGKD APTAADKLGK DFYEVILQEE PFKSTTVRTI LKSFRWAPFL PVSTESSMLS VMLLLSKYRL RNVPVIKTGE PDIKNYVTQS AVVHGLEGCK
301: GRDWFDHISA LPISDLGLPF MSPNEVISIE SEELILEAFK RMRDNNIGGL PVVEGLNKKI VGNISMRDIR YLLLQPEVFS NFRQLTVKSF ATKIATAGEE
401: YGLAIPAITC RPDSTLGSVI NSLASRSVHR VYVAAGDENE LYGVITLRDV ISCFVSEPPN YFENCLGFSV KEMLNR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.