Factsheet for Bra007883.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013236.1-P	Field mustard	mitochondrion	49.1	100.0
CDY71798	Canola	cytosol	99.1	99.1
AT1G69800.2	Thale cress	mitochondrion	88.79	83.19
VIT_01s0026g01740.t01	Wine grape	cytosol	67.49	67.79
PGSC0003DMT400002254	Potato	cytosol, endoplasmic reticulum, peroxisome	65.25	65.54
KRH74794	Soybean	cytosol	64.57	65.01
Solyc01g010700.2.1	Tomato	nucleus	64.57	64.86
GSMUA_Achr7P23930_001	Banana	cytosol	63.23	63.8
Os01t0586600-01	Rice	cytosol	29.82	60.18
KRH69332	Soybean	endoplasmic reticulum, vacuole	63.9	59.01
Zm00001d044315_P004	Maize	cytosol	58.97	58.31
TraesCS2D01G185000.1	Wheat	cytosol, peroxisome, plasma membrane	59.19	58.28
EES03176	Sorghum	cytosol, peroxisome, plasma membrane	58.74	58.09
TraesCS2A01G177000.1	Wheat	cytosol, peroxisome, plasma membrane	58.97	58.06
TraesCS2B01G203900.2	Wheat	cytosol, peroxisome, plasma membrane	58.97	58.06
HORVU2Hr1G032570.2	Barley	cytosol, plasma membrane	59.19	47.65
Bra018050.1-P	Field mustard	cytosol	31.61	33.41
Bra029902.1-P	Field mustard	mitochondrion	32.06	31.36

Protein Annotations

EnsemblPlants:Bra007883.1	EnsemblPlants:Bra007883.1-P	EnsemblPlantsGene:Bra007883	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644
PANTHER:PTHR13780	PANTHER:PTHR13780:SF47	PFAM:PF00571	PFscan:PS51371	SEG:seg	SMART:SM00116
SUPFAM:SSF54631	UniParc:UPI000254687A	UniProt:M4CUI8	MapMan:18.4.5.1.3	MapMan:27.3.1.3	:

Description

AT1G69800 (E=3e-187) | CBS domain-containing protein

Coordinates

chrA02:-:11565182..11573744

Molecular Weight (calculated)

48012.7 Da

IEP (calculated)

6.385

GRAVY (calculated)

0.100

Length

446 amino acids

Sequence
(BLAST)

001: MAGSESLDKE ISSAVSSCEA YFEKVQSRKN LPKSLQETLN SAFAGIPVSS FPRVPGGRVI EIPAQTSVSE AVKILSDSKI LSAPVINKDH ESSLDWRERY
101: LGIIDYSSII LWVLESAELA AIALSATSAT AAGVGAGAVG ALGVVALGAT GPVAAAGLAA AAVGAAVAGG VAADRGIGKY APTAVDRLGK DFYQVILREE
201: PFKSTTVRTI LKSFRYAPFV PVSTESSMLS VLLLLSKYRL RNVPVIKPGE PDIKNYITQS AVVYGLEDCK GRDWFDHISA LPISDLGLPF MSPKEVISID
301: SDEHILEAFK RMRDNNIGGL PVVEGTNKKI VGNISMRDIR YLLLQPQVFS NFRHLTVRNF TTKIATAGEE YGLAIPAITC RPDSTLGSVI NSLASRSVHR
401: VYVGEGDENE LYGVITLRDV ISCFVSEPPN YFENYLGFSV KEMLNR

Best Arabidopsis Sequence Match ( AT1G69800.1 )
(BLAST)

001: MAGSEAVEDK EIKSAVSSCE AYFEKVQSRK NLPKSLQETL NSAFAGIPVS SFPQVPGGRV IEIQAETPVS EAVKILSDSK ILSAPVINTD HESSLDWRER
101: YLGIIDYSSI ILWVLESAEL AAIALSATSA TAAGVGAGAV GALGVAALGM TGPVAAAGLA AAAVGAAVAG GVAAERGIGK DAPTAADKLG KDFYEVILQE
201: EPFKSTTVRT ILKSFRWAPF LPVSTESSML SVMLLLSKYR LRNVPVIKTG EPDIKNYVTQ SAVVHGLEGC KGRDWFDHIS ALPISDLGLP FMSPNEVISI
301: ESEELILEAF KRMRDNNIGG LPVVEGLNKK IVGNISMRDI RYLLLQPEVF SNFRQLTVKS FATKIATAGE EYGLAIPAIT CRPDSTLGSV INSLASRSVH
401: RVYVAAGDEN ELYGVITLRD VISCFVSEPP NYFENCLGFS VKEMLNR

Arabidopsis Description

Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.