Factsheet for Os01t0586600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G203900.2	Wheat	cytosol, peroxisome, plasma membrane	80.09	39.07
TraesCS2D01G185000.1	Wheat	cytosol, peroxisome, plasma membrane	79.64	38.85
TraesCS2A01G177000.1	Wheat	cytosol, peroxisome, plasma membrane	79.64	38.85
Zm00001d044315_P004	Maize	cytosol	76.02	37.25
EES03176	Sorghum	cytosol, peroxisome, plasma membrane	76.02	37.25
GSMUA_Achr7P23930_001	Banana	cytosol	64.71	32.35
VIT_01s0026g01740.t01	Wine grape	cytosol	64.71	32.21
HORVU2Hr1G032570.2	Barley	cytosol, plasma membrane	76.02	30.32
CDY56064	Canola	cytosol	61.09	30.27
CDY71798	Canola	cytosol	61.09	30.27
Bra007883.1-P	Field mustard	cytosol	60.18	29.82
KRH74794	Soybean	cytosol	58.82	29.35
Solyc01g010700.2.1	Tomato	nucleus	58.82	29.28
PGSC0003DMT400002254	Potato	cytosol, endoplasmic reticulum, peroxisome	58.37	29.05
AT1G69800.2	Thale cress	mitochondrion	58.37	27.1
KRH69332	Soybean	endoplasmic reticulum, vacuole	57.92	26.5
CDY11653	Canola	cytosol	46.61	24.64
CDY38762	Canola	nucleus	47.06	13.33
Os01t0921500-01	Rice	plasma membrane, plastid	24.89	12.64
Os04t0382300-01	Rice	cytoskeleton, cytosol, peroxisome	23.53	12.24
Os01t0633400-01	Rice	nucleus	15.38	8.35
Bra013236.1-P	Field mustard	mitochondrion	1.81	1.83

Protein Annotations

EnsemblPlants:Os01t0586600-01	EnsemblPlantsGene:Os01g0586600	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780
PANTHER:PTHR13780:SF47	PFscan:PS51371	ProteinID:BAS72909.1	SEG:seg	SMART:SM00116	SUPFAM:SSF54631
UniParc:UPI0003938A88	UniProt:A0A0P0V4K5	MapMan:35.1	:	:	:

Description

cystathionine b-synthase domain containing protein OsCBSX7, CBS domain containing protein OsCBSX7Similar to AKIN gamma. (Os01t0586600-01)

Coordinates

chr1:-:22820253..22823095

Molecular Weight (calculated)

22846.5 Da

IEP (calculated)

4.455

GRAVY (calculated)

0.448

Length

221 amino acids

Sequence
(BLAST)

001: MDRPDETVKF PSCDAYFDTI QSKKKLPLSL QESLTAAFAQ IPVSSFPDVP NGRVIEIPGD TSVLDAVRIL SKHNIRAAPV LNPECGAPAD WKGRYLGIID
101: YSAIILWVLE NAEIAAVALS AGSATAAGVG MGAVGAVGVA ALGATGPAAV AGLTAAAVGA AVAGGLTAEK GVAKDGLTAA DHLGEDFYKV LLQQEPFKST
201: TVCILLYDEL LCIFGFFFPF C

Best Arabidopsis Sequence Match ( AT1G69800.3 )
(BLAST)

001: MAGSEAVEDK EIKSAVSSCE AYFEKVQSRK NLPKSLQETL NSAFAGIPVS SFPQVPGGRV IEIQAETPVS EAVKILSDSK ILSAPVINTD HESSLDWRER
101: YLGIIDYSSI ILWVLESAEL AAIALSATSA TAAGVGAGAV GALGVAALGM TGPVAAAGLA AAAVGAAVAG GVAAERGIGK DAPTAADKLG KDFYEVILQE
201: EPFKSTTVRT ILKSFRWAPF LPVSTESSML SVMLLLSKYR LRNVPVIKTG EPDIKNYVTQ SAVVHGLEGC KGRDWFDHIS ALPISDLGLP FMSPNEVISI
301: ESEELILEAF KRMRDNNIGG LPVVEGLNKK IVGNISMRDI RYLLLQPEVF SNFRFIFTHL FLITTSLVTM MTE

Arabidopsis Description

Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.