Factsheet for Os04t0382300-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os05t0530500-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48530.1	Os05t0530500-02	AT3G29160.1	10417704

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G299000.1	Wheat	cytosol	90.35	90.35
KXG26065	Sorghum	cytosol	89.88	90.31
TraesCS2D01G280600.1	Wheat	cytosol	90.12	90.12
TraesCS2A01G281700.1	Wheat	cytosol	89.65	89.65
Zm00001d004006_P001	Maize	cytosol, extracellular	88.94	89.36
HORVU2Hr1G069060.5	Barley	cytosol	88.71	81.43
Solyc03g111310.2.1	Tomato	unclear	63.06	62.91
KRH63760	Soybean	cytosol	60.47	62.53
PGSC0003DMT400039410	Potato	peroxisome	62.59	62.44
VIT_17s0000g01460.t01	Wine grape	peroxisome	62.12	61.4
KRH54191	Soybean	nucleus	60.24	58.72
Bra018050.1-P	Field mustard	cytosol	58.12	58.53
CDY08080	Canola	cytosol	57.65	58.19
AT3G48530.1	Thale cress	cytosol	57.41	57.55
CDX68465	Canola	cytosol	56.71	56.84
CDY59154	Canola	cytosol	56.94	56.81
KRH57227	Soybean	cytosol	57.88	56.42
KRH03956	Soybean	peroxisome	58.59	56.08
CDY70744	Canola	cytosol	48.71	54.91
Os01t0921500-01	Rice	plasma membrane, plastid	54.82	53.56
Bra029902.1-P	Field mustard	mitochondrion	56.71	52.85
GSMUA_Achr3P19540_001	Banana	nucleus	68.71	33.91
Os01t0586600-01	Rice	cytosol	12.24	23.53
Os01t0633400-01	Rice	nucleus	21.65	22.6

Protein Annotations

MapMan:18.4.5.1.3	MapMan:27.3.1.3	Gene3D:3.10.580.10	EntrezGene:4335640	EMBL:AK071912	EMBL:AK101795
ProteinID:BAF14521.1	ProteinID:BAS88901.1	ProteinID:CAD40738.2	InterPro:CBS_dom	GO:GO:0003674	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0009987	GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0030312	InterPro:IPR000644
EnsemblPlantsGene:Os04g0382300	EnsemblPlants:Os04t0382300-01	PFAM:PF00571	PFscan:PS51371	PANTHER:PTHR13780	PANTHER:PTHR13780:SF36
UniProt:Q7XVC0	SMART:SM00116	SUPFAM:SSF54631	UniParc:UPI000021C88A	RefSeq:XP_015635849.1	:

Description

cystathionine b-synthase domain containing protein OsCBSCBS3, CBS domain containing protein OsCBSCBS3Similar to SNF1-related protein kinase regulatory gamma subunit 1 (AKIN gamma1) (AKING1). (Os04t0382300-01);Similar to SNF1-related protein kinase regulatory gamma subunit 1 (AKIN gamma1) (AKING1). (Os04t0382300-02);Similar to OSIGBa0092E09.6 protein. (Os04t0382300-03)

Coordinates

chr4:-:18746928..18752050

Molecular Weight (calculated)

46858.1 Da

IEP (calculated)

4.864

GRAVY (calculated)

-0.116

Length

425 amino acids

Sequence
(BLAST)

001: MEMESPRSPE AEIGHRVEDL WEVAEPQLSP SEKLNSCFED IAVASFPRPL GSQVIEIPSN ASLADTVEIL SKNKILSAPI RNVDAPEDAS WIDKYIGIVE
101: FAGIAMWLLY QSEAAANGTA GSAVGSPVAN LVSRLGSFTF RRTSSGRVET TTDPESDETA SVGGSFFETL TSSEFYKNTK VGDISGSFRW APFLALQTSD
201: TFLTMLLLLS KYRMKSLPVV DIGGDKIENI ITQSSVVHML AECVGLPWFE SWGTKKLSEL GLPLMKPCKL VKVNEDQPVL KAFQLMREKG VGGLPVMDTS
301: GTKAIGNISI RDVQYLLTAP NIYKDYRTIT AKDFLTAVRQ HLQEQHEASP LLGSVITCRR DDEVKDIILK LDSEKIHRIY VIDDKGNTEG VITLRDIISK
401: LVHEPRHYFG DFFDGVVPLP PNSTV

Best Arabidopsis Sequence Match ( AT3G48530.1 )
(BLAST)

001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV

Arabidopsis Description

KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.