Factsheet for Bra018050.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra025379.1-P
Bra033088.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48530.1	Bra025379.1-P	AT3G29160.1	10417704
AT3G48530.1	Bra033088.1-P	AT3G29160.1	10417704

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08080	Canola	cytosol	98.82	99.05
CDY59154	Canola	cytosol	95.73	94.84
AT3G48530.1	Thale cress	cytosol	91.0	90.57
Bra029902.1-P	Field mustard	mitochondrion	93.84	86.84
KRH63760	Soybean	cytosol	68.48	70.32
KRH54191	Soybean	nucleus	68.48	66.28
VIT_17s0000g01460.t01	Wine grape	peroxisome	67.54	66.28
KRH57227	Soybean	cytosol	68.01	65.83
KRH03956	Soybean	peroxisome	68.01	64.64
Solyc03g111310.2.1	Tomato	unclear	63.51	62.91
PGSC0003DMT400039410	Potato	peroxisome	63.51	62.91
KXG26065	Sorghum	cytosol	59.48	59.34
Zm00001d004006_P001	Maize	cytosol, extracellular	59.0	58.87
TraesCS2B01G299000.1	Wheat	cytosol	59.0	58.59
TraesCS2D01G280600.1	Wheat	cytosol	58.77	58.35
Os04t0382300-01	Rice	cytoskeleton, cytosol, peroxisome	58.53	58.12
TraesCS2A01G281700.1	Wheat	cytosol	58.29	57.88
HORVU2Hr1G069060.5	Barley	cytosol	58.29	53.13
GSMUA_AchrUn_...	Banana	extracellular, vacuole	51.9	50.23
Bra013236.1-P	Field mustard	mitochondrion	20.38	39.27
Bra007883.1-P	Field mustard	cytosol	33.41	31.61
GSMUA_Achr3P19540_001	Banana	nucleus	60.19	29.5

Protein Annotations

EnsemblPlants:Bra018050.1	EnsemblPlants:Bra018050.1-P	EnsemblPlantsGene:Bra018050	Gene3D:3.10.580.10	GO:GO:0003674	GO:GO:0003824
InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780	PANTHER:PTHR13780:SF36	PFAM:PF00571	PFscan:PS51371
SEG:seg	SMART:SM00116	SUPFAM:SSF54631	UniParc:UPI000253F2AB	UniProt:M4DNG3	MapMan:18.4.5.1.3
MapMan:27.3.1.3	:	:	:	:	:

Description

AT3G48530 (E=3e-222) KING1 | KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1)

Coordinates

chrA06:-:9819715..9821468

Molecular Weight (calculated)

47118.7 Da

IEP (calculated)

5.030

GRAVY (calculated)

-0.080

Length

422 amino acids

Sequence
(BLAST)

001: MASVPEIKIV RSESLGHRSE VSSPEAKLGM RVEDLWDEQK PQLSPDEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVETLSKLKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLDPT SPRSPAVAGS NGTSHDFTAD IGDDSAVTSG NFFEVLTSSE LYKNTKVRDI SGTFRWAPFL ALQKDNSFLT
201: MLLLLSKYKM KSIPVVDLGE AKIENIITQS GVIHMLAECV GLHWFEDWGV KTLSEVGLPI MSKDHIIKIY EDEPVLQAFK LMRRKRIGGI PVIERKSEKP
301: VGNISLRDVH FLLTAPEIYH DYRSITTKNF LVAVREHLEK RGDTSAPILS GVIACTKNHT LKELILMLDA EKIHRLYVVD DSGNLEGLIT LRDIIARLVY
401: EPPGYFGDFF DGVMPLPQNY RV

Best Arabidopsis Sequence Match ( AT3G48530.1 )
(BLAST)

001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV

Arabidopsis Description

KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.