Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007883.1-P | Field mustard | cytosol | 100.0 | 49.1 |
| CDY71798 | Canola | cytosol | 99.09 | 48.65 |
| AT1G69800.2 | Thale cress | mitochondrion | 91.78 | 42.23 |
| VIT_01s0026g01740.t01 | Wine grape | cytosol | 68.95 | 34.01 |
| KRH74794 | Soybean | cytosol | 66.67 | 32.96 |
| PGSC0003DMT400002254 | Potato | cytosol, endoplasmic reticulum, peroxisome | 65.75 | 32.43 |
| Solyc01g010700.2.1 | Tomato | nucleus | 65.3 | 32.21 |
| GSMUA_Achr7P23930_001 | Banana | cytosol | 63.47 | 31.45 |
| KRH69332 | Soybean | endoplasmic reticulum, vacuole | 66.67 | 30.23 |
| EES03176 | Sorghum | cytosol, peroxisome, plasma membrane | 60.73 | 29.49 |
| Zm00001d044315_P004 | Maize | cytosol | 60.73 | 29.49 |
| TraesCS2A01G177000.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.73 | 29.36 |
| TraesCS2D01G185000.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.73 | 29.36 |
| TraesCS2B01G203900.2 | Wheat | cytosol, peroxisome, plasma membrane | 60.27 | 29.14 |
| HORVU2Hr1G032570.2 | Barley | cytosol, plasma membrane | 60.73 | 24.01 |
| Bra018050.1-P | Field mustard | cytosol | 39.27 | 20.38 |
| Bra029902.1-P | Field mustard | mitochondrion | 39.73 | 19.08 |
| Os01t0586600-01 | Rice | cytosol | 1.83 | 1.81 |
Protein Annotations
Description
AT1G69800 (E=1e-108) | CBS domain-containing protein
Coordinates
chrA03:-:19723679..19724404
Molecular Weight (calculated)
24627.8 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.071
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSVLLLLSK YRLRNVPVIK PGEPDIKNYI TQSAVVYGLE DCKGRDWFDH ISALPISDLG LPFMSPKEVI SIDSDEHILE AFKRMRDNNI GGLPVVEGTN
101: KKIVGNISMR DIRYLLLQPQ VFSNFRHLTV RNFTTKIATA GEEYGLAIPA ITCRPDSTLG SVINSLASRS VHRVYVGEGD ENELYGVITL RDVISCFVSE
201: PPNYFENYLG FSVKEMLNR
101: KKIVGNISMR DIRYLLLQPQ VFSNFRHLTV RNFTTKIATA GEEYGLAIPA ITCRPDSTLG SVINSLASRS VHRVYVGEGD ENELYGVITL RDVISCFVSE
201: PPNYFENYLG FSVKEMLNR
001: MAGSEAVEDK EIKSAVSSCE AYFEKVQSRK NLPKSLQETL NSAFAGIPVS SFPQVPGGRV IEIQAETPVS EAVKILSDSK ILSAPVINTD HESSLDWRER
101: YLGIIDYSSI ILWVLESAEL AAIALSATSA TAAGVGAGAV GALGVAALGM TGPVAAAGLA AAAVGAAVAG GVAAERGIGK DAPTAADKLG KDFYEVILQE
201: EPFKSTTVRT ILKSFRWAPF LPVSTESSML SVMLLLSKYR LRNVPVIKTG EPDIKNYVTQ SAVVHGLEGC KGRDWFDHIS ALPISDLGLP FMSPNEVISI
301: ESEELILEAF KRMRDNNIGG LPVVEGLNKK IVGNISMRDI RYLLLQPEVF SNFRQLTVKS FATKIATAGE EYGLAIPAIT CRPDSTLGSV INSLASRSVH
401: RVYVAAGDEN ELYGVITLRD VISCFVSEPP NYFENCLGFS VKEMLNR
101: YLGIIDYSSI ILWVLESAEL AAIALSATSA TAAGVGAGAV GALGVAALGM TGPVAAAGLA AAAVGAAVAG GVAAERGIGK DAPTAADKLG KDFYEVILQE
201: EPFKSTTVRT ILKSFRWAPF LPVSTESSML SVMLLLSKYR LRNVPVIKTG EPDIKNYVTQ SAVVHGLEGC KGRDWFDHIS ALPISDLGLP FMSPNEVISI
301: ESEELILEAF KRMRDNNIGG LPVVEGLNKK IVGNISMRDI RYLLLQPEVF SNFRQLTVKS FATKIATAGE EYGLAIPAIT CRPDSTLGSV INSLASRSVH
401: RVYVAAGDEN ELYGVITLRD VISCFVSEPP NYFENCLGFS VKEMLNR
Arabidopsis Description
Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.