Factsheet for TraesCS2A01G177000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G185000.1	Wheat	cytosol, peroxisome, plasma membrane	98.9	98.9
TraesCS2B01G203900.2	Wheat	cytosol, peroxisome, plasma membrane	98.68	98.68
EES03176	Sorghum	cytosol, peroxisome, plasma membrane	86.09	86.47
Zm00001d044315_P004	Maize	cytosol	85.65	86.03
Os01t0586600-01	Rice	cytosol	38.85	79.64
HORVU2Hr1G032570.2	Barley	cytosol, plasma membrane	94.48	77.26
GSMUA_Achr7P23930_001	Banana	cytosol	65.34	66.97
KRH74794	Soybean	cytosol	61.59	62.98
PGSC0003DMT400002254	Potato	cytosol, endoplasmic reticulum, peroxisome	61.15	62.39
VIT_01s0026g01740.t01	Wine grape	cytosol	60.93	62.16
Solyc01g010700.2.1	Tomato	nucleus	59.82	61.04
Bra013236.1-P	Field mustard	mitochondrion	29.36	60.73
Bra007883.1-P	Field mustard	cytosol	58.06	58.97
CDY71798	Canola	cytosol	57.84	58.74
CDY56064	Canola	cytosol	57.4	58.3
KRH69332	Soybean	endoplasmic reticulum, vacuole	60.49	56.73
CDY11653	Canola	cytosol	51.88	56.22
AT1G69800.2	Thale cress	mitochondrion	58.72	55.88
TraesCS2A01G281700.1	Wheat	cytosol	28.7	30.59
CDY38762	Canola	nucleus	51.66	30.0
TraesCS3A01G429700.1	Wheat	peroxisome	27.59	29.14
TraesCS3A01G226700.1	Wheat	nucleus	18.54	20.95

Protein Annotations

EnsemblPlants:TraesCS2A01G177000.1	EnsemblPlantsGene:TraesCS2A01G177000	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780
PANTHER:PTHR13780:SF47	PFAM:PF00571	PFscan:PS51371	SEG:seg	SMART:SM00116	SUPFAM:SSF54631
TIGR:cd02205	TIGR:cd04642	MapMan:18.4.5.1.3	MapMan:27.3.1.3	:	:

Description

No Description!

Coordinates

chr2A:-:136164724..136167174

Molecular Weight (calculated)

48058.9 Da

IEP (calculated)

4.587

GRAVY (calculated)

0.213

Length

453 amino acids

Sequence
(BLAST)

001: MARPEENAKF PSCDAYFDTI QSKKKLPLAL QESLTAAFAQ IPVASFPDVP SGRVTEIPGE TSVLDAVRIL SEHNIRAAPV LNPEPGAPAD WQGRYLGIIE
101: YSAIILWVLD NADLAAVALS AGSATAAGVG MGAVGAVGVA ALGVTGPAAV AGLTAAAVGA AVAGGLTAEK GVAKDGVTAA DHLGEDFYKV LLQQEPFKST
201: TVRSIVESYP WSPFVPVTLD SSMLAVLLLL SKYRLRNVPV IEPDKPVIKN FITQTGVVKG LQQCKGRDWF DYISALPLSD LGLPFMSLDE VITVNSDDLI
301: LEAFKCMKDN KIGGVPVVEG PRRKLVGSVS IRDIRFLLLR PDLFSDFRHL TVLDFMKALG STLPDSGDNG LVKPPLTCAP DASMGSVIDS IGSRITHRIY
401: VVDGDFEVVG VVTLRDVISC FIHEPPGFCD SYLASAMEKL EDKGDADSSV ENS

Best Arabidopsis Sequence Match ( AT1G69800.2 )
(BLAST)

001: MHFIRTRVTA RKAKPKICLK FFKLSRYQDM AGSEAVEDKE IKSAVSSCEA YFEKVQSRKN LPKSLQETLN SAFAGIPVSS FPQVPGGRVI EIQAETPVSE
101: AVKILSDSKI LSAPVINTDH ESSLDWRERY LGIIDYSSII LWVLESAELA AIALSATSAT AAGVGAGAVG ALGVAALGMT GPVAAAGLAA AAVGAAVAGG
201: VAAERGIGKD APTAADKLGK DFYEVILQEE PFKSTTVRTI LKSFRWAPFL PVSTESSMLS VMLLLSKYRL RNVPVIKTGE PDIKNYVTQS AVVHGLEGCK
301: GRDWFDHISA LPISDLGLPF MSPNEVISIE SEELILEAFK RMRDNNIGGL PVVEGLNKKI VGNISMRDIR YLLLQPEVFS NFRQLTVKSF ATKIATAGEE
401: YGLAIPAITC RPDSTLGSVI NSLASRSVHR VYVAAGDENE LYGVITLRDV ISCFVSEPPN YFENCLGFSV KEMLNR

Arabidopsis Description

Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.