Factsheet for Zm00001d044315_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03176	Sorghum	cytosol, peroxisome, plasma membrane	94.01	94.01
TraesCS2B01G203900.2	Wheat	cytosol, peroxisome, plasma membrane	86.03	85.65
TraesCS2A01G177000.1	Wheat	cytosol, peroxisome, plasma membrane	86.03	85.65
TraesCS2D01G185000.1	Wheat	cytosol, peroxisome, plasma membrane	85.81	85.43
Os01t0586600-01	Rice	cytosol	37.25	76.02
HORVU2Hr1G032570.2	Barley	cytosol, plasma membrane	83.81	68.23
GSMUA_Achr7P23930_001	Banana	cytosol	66.3	67.65
PGSC0003DMT400002254	Potato	cytosol, endoplasmic reticulum, peroxisome	62.53	63.51
KRH74794	Soybean	cytosol	61.64	62.75
VIT_01s0026g01740.t01	Wine grape	cytosol	61.64	62.61
Solyc01g010700.2.1	Tomato	nucleus	61.2	62.16
Bra013236.1-P	Field mustard	mitochondrion	29.49	60.73
Bra007883.1-P	Field mustard	cytosol	58.31	58.97
CDY71798	Canola	cytosol	58.09	58.74
CDY56064	Canola	cytosol	57.21	57.85
CDY11653	Canola	cytosol	53.22	57.42
KRH69332	Soybean	endoplasmic reticulum, vacuole	60.53	56.52
AT1G69800.2	Thale cress	mitochondrion	59.42	56.3
Zm00001d004006_P001	Maize	cytosol, extracellular	28.82	30.73
CDY38762	Canola	nucleus	52.33	30.26
Zm00001d012019_P001	Maize	peroxisome	26.61	27.46
Zm00001d044124_P001	Maize	cytosol	20.18	22.36

Protein Annotations

EntrezGene:100286384	MapMan:18.4.5.1.3	MapMan:27.3.1.3	Gene3D:3.10.580.10	UniProt:B4FX20	EMBL:BT041658
EMBL:BT068451	InterPro:CBS_dom	EMBL:EU977125	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0042802	InterPro:IPR000644	ProteinID:ONM40857.1	ProteinID:ONM40862.1	ProteinID:ONM40863.1
ProteinID:ONM40864.1	PFAM:PF00571	PFscan:PS51371	PANTHER:PTHR13780	PANTHER:PTHR13780:SF47	SMART:SM00116
SUPFAM:SSF54631	UniParc:UPI00017B7630	EnsemblPlantsGene:Zm00001d044315	EnsemblPlants:Zm00001d044315_P004	EnsemblPlants:Zm00001d044315_T004	SEG:seg

Description

WRKY-transcription factor 7SNF1-related protein kinase regulatory subunit gamma-1-like

Coordinates

chr3:-:225036651..225051676

Molecular Weight (calculated)

48419.5 Da

IEP (calculated)

4.645

GRAVY (calculated)

0.174

Length

451 amino acids

Sequence
(BLAST)

001: MDQPEENPEF PSCDAYFEAI QSKKKLPLTL QESLTAAFAQ IPVSSFPEVP AGRVIEIPGD TSVIDAVRTL SEQNIRAAPV LNPEPGAPTD WQGRYLGVID
101: YSAIILWVLE NAELAAVALS AASATAAGVG MGAVGAVGVA ALGTTGPAAV AGLTAAAIGA SVAGGLTAEK GVAKDGLTAA DHLGEDFYKV LLQQEPFRST
201: TVRSIVESYR WSPFVPITLD TSMLTVLLLL SKYRLRNVPV IEPEKPIIRN FITQTGVVKG LQQCKGRDWF DYISALPLSD LGLPFMSIDE VITVNSDDLI
301: LEAFKCMKDN KIGGVPVVEG PKRKLVGSVS IRDIRFLLLR PNLFSNFRQL TVIEFMKTLG STLPDSESNC LVKPPPTCTP DASLGSVIDS IASRITHRIY
401: VVDDDLEVVG VVTLRDVISC FIHEPPGYCD NYLASAMEKL EGKGVRSVEK I

Best Arabidopsis Sequence Match ( AT1G69800.1 )
(BLAST)

001: MAGSEAVEDK EIKSAVSSCE AYFEKVQSRK NLPKSLQETL NSAFAGIPVS SFPQVPGGRV IEIQAETPVS EAVKILSDSK ILSAPVINTD HESSLDWRER
101: YLGIIDYSSI ILWVLESAEL AAIALSATSA TAAGVGAGAV GALGVAALGM TGPVAAAGLA AAAVGAAVAG GVAAERGIGK DAPTAADKLG KDFYEVILQE
201: EPFKSTTVRT ILKSFRWAPF LPVSTESSML SVMLLLSKYR LRNVPVIKTG EPDIKNYVTQ SAVVHGLEGC KGRDWFDHIS ALPISDLGLP FMSPNEVISI
301: ESEELILEAF KRMRDNNIGG LPVVEGLNKK IVGNISMRDI RYLLLQPEVF SNFRQLTVKS FATKIATAGE EYGLAIPAIT CRPDSTLGSV INSLASRSVH
401: RVYVAAGDEN ELYGVITLRD VISCFVSEPP NYFENCLGFS VKEMLNR

Arabidopsis Description

Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.