Factsheet for Zm00001d012019_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04118	Sorghum	cytosol	87.64	87.24
HORVU3Hr1G094560.3	Barley	cytosol, mitochondrion, peroxisome	75.51	74.66
TraesCS3D01G425000.1	Wheat	peroxisome	73.23	74.42
TraesCS3A01G429700.1	Wheat	peroxisome	72.31	73.66
TraesCS3B01G467600.1	Wheat	peroxisome	73.68	73.18
Os01t0921500-01	Rice	plasma membrane, plastid	71.62	71.95
Zm00001d004006_P001	Maize	cytosol, extracellular	54.92	56.74
Zm00001d044315_P004	Maize	cytosol	27.46	26.61
Zm00001d044124_P001	Maize	cytosol	20.82	22.36

Protein Annotations

MapMan:18.4.5.1.3	MapMan:27.3.1.3	Gene3D:3.10.580.10	UniProt:A0A1D6G5V2	ProteinID:AQK98594.1	InterPro:CBS_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	InterPro:IPR000644	PFAM:PF00571	PFscan:PS51371	PANTHER:PTHR13780
PANTHER:PTHR13780:SF93	SMART:SM00116	SUPFAM:SSF54631	UniParc:UPI00084432D7	EnsemblPlantsGene:Zm00001d012019	EnsemblPlants:Zm00001d012019_P001
EnsemblPlants:Zm00001d012019_T001	SEG:seg	:	:	:	:

Description

SNF1-related protein kinase regulatory subunit gamma-1

Coordinates

chr8:+:166620718..166622319

Molecular Weight (calculated)

47356.6 Da

IEP (calculated)

5.131

GRAVY (calculated)

-0.054

Length

437 amino acids

Sequence
(BLAST)

001: MQAVRTRAEQ RGAEAEATPH GSARSWSPEA EIGMRVEDIW DSLDVQQRQL SHGDKLNSCF DSIPVASFPH AFDGAQLVEI PSDATLAEAV DILSRNRIIS
101: APVRNVDAPE DASWIDRYIG IVEFPGIASE AAATAEVGAD ELAAKLGTVT LEGAAAAAAA AAVTSKAAAE PEGAIAEVFG ALPSSDLFNK TKVKDISGSF
201: RWAPFLALQS SDTFLTMLLL LSKYRMKSLP VVDIGEGTIS NIITQAAVVH MLSECVGLHW FEEWGTKTLS EIGLPIMRLS KIVKVREDEP ALKAFRLMRR
301: KGVGGIPVVD DSGRAVGSIM IKDVKHLLTA SETNRDYRSE TAACRTLTAK EFIANARQSS GERQMSIITC KRGDSVKDII LKLDAEKRQR IYVINEEGNL
401: DGLITLRDII AKLVYEPPGY FGDFFNGVIP LPSNSRV

Best Arabidopsis Sequence Match ( AT3G48530.1 )
(BLAST)

001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV

Arabidopsis Description

KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.