Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G425000.1 | Wheat | peroxisome | 86.65 | 89.07 |
| TraesCS3B01G467600.1 | Wheat | peroxisome | 88.24 | 88.64 |
| TraesCS3A01G429700.1 | Wheat | peroxisome | 85.97 | 88.58 |
| EES04118 | Sorghum | cytosol | 77.38 | 77.9 |
| Zm00001d012019_P001 | Maize | peroxisome | 74.66 | 75.51 |
| Os01t0921500-01 | Rice | plasma membrane, plastid | 73.76 | 74.94 |
| HORVU2Hr1G069060.5 | Barley | cytosol | 54.52 | 52.05 |
| HORVU2Hr1G032570.2 | Barley | cytosol, plasma membrane | 28.96 | 23.1 |
Protein Annotations
| EMBL:AK376146 | EnsemblPlants:HORVU3Hr1G094560.3 | EnsemblPlantsGene:HORVU3Hr1G094560 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 |
| PANTHER:PTHR13780 | PANTHER:PTHR13780:SF93 | PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SMART:SM00116 |
| SUPFAM:SSF54631 | UniParc:UPI0002008BA7 | UniProt:F2EJ19 | MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EJ19]
Coordinates
chrchr3H:+:646326698..646328455
Molecular Weight (calculated)
48333.8 Da
IEP (calculated)
4.753
GRAVY (calculated)
-0.163
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MQARREIRTK PERREEEEED AAVAVPETPL SARWSPEAEI GMRVEDIWDS LDQPQLSRGD KLNSCFDAIP VSSFPQTFGS QLVDIPSDAT LAEAVDILSR
101: NRINGAPVRN VEAPEDASWI DRYIGIVEFA GIAVWLLHQS EASASAAALG ADELAAKLGT VTLDAGSGGA RELKPAAASE AEGAVAEAFG SLPSSELFMK
201: TKVKDISGSF RWAPFLALQS SDTFLTMLLL LSKYRMKSLP VVDIGEGTIS NIVTQAAVVH MLSECVGLSW FEDWGTKTLA ELGLPIMKTS RLVKVREDEP
301: ALKAFRQMRR RGVGGIPVVD GAGKPVGSIM IKDVKHLLTA SDSESNKDYR TLTAREFIAS ARQSSGEKQM SIITCTREDN MKEIILKLDA EKRQRIYVVN
401: EDGNLDGLIT LRDIIAKLVY EPPGYFGDFF NGVIPMPQNS RV
101: NRINGAPVRN VEAPEDASWI DRYIGIVEFA GIAVWLLHQS EASASAAALG ADELAAKLGT VTLDAGSGGA RELKPAAASE AEGAVAEAFG SLPSSELFMK
201: TKVKDISGSF RWAPFLALQS SDTFLTMLLL LSKYRMKSLP VVDIGEGTIS NIVTQAAVVH MLSECVGLSW FEDWGTKTLA ELGLPIMKTS RLVKVREDEP
301: ALKAFRQMRR RGVGGIPVVD GAGKPVGSIM IKDVKHLLTA SDSESNKDYR TLTAREFIAS ARQSSGEKQM SIITCTREDN MKEIILKLDA EKRQRIYVVN
401: EDGNLDGLIT LRDIIAKLVY EPPGYFGDFF NGVIPMPQNS RV
001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
Arabidopsis Description
KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.