Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G429700.1 | Wheat | peroxisome | 94.65 | 94.87 |
| TraesCS3B01G467600.1 | Wheat | peroxisome | 89.77 | 87.73 |
| HORVU3Hr1G094560.3 | Barley | cytosol, mitochondrion, peroxisome | 89.07 | 86.65 |
| EES04118 | Sorghum | cytosol | 76.05 | 74.49 |
| Os01t0921500-01 | Rice | plasma membrane, plastid | 74.42 | 73.56 |
| Zm00001d012019_P001 | Maize | peroxisome | 74.42 | 73.23 |
| TraesCS2D01G280600.1 | Wheat | cytosol | 54.88 | 55.53 |
| TraesCS2D01G185000.1 | Wheat | cytosol, peroxisome, plasma membrane | 29.77 | 28.26 |
| TraesCS3D01G224700.1 | Wheat | nucleus | 23.02 | 24.44 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G425000.1 | EnsemblPlantsGene:TraesCS3D01G425000 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF93 | PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 |
| TIGR:cd04642 | MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:537144499..537146263
Molecular Weight (calculated)
47069.5 Da
IEP (calculated)
4.958
GRAVY (calculated)
-0.129
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MQARREIRTK PEQRGEEDAA AVAETPLSAR WSPEAEIGMR VEDIWDSLDQ PQLSRSDKLN SCFDAIPVSS FPQTFGSQLV DIPSDATLAE AVDILSRNRI
101: NGAPVRNVEA PEDASWIDRY IGIVEFAGIA VWLLHQSETS AAALGADEVA AKLGTVTLDP ELKPAAPASE AEGAVAEAFG SLPSSELFRK TKVKDISGSF
201: RWAPFLALQS SDTFLTMLLL LSKYRMKSLP VVDIGEGTIS NMVTQAAVVH MLAECVGLSW FEDWGTKTLA ELGLPLMKTS RLVKVCEDDP ALKAFRQMRR
301: RGVGGIPVVD GAGKPVGSIM IKDVKHLLTA SESTGHYRTL TAREFIASAR QSSGEKQMSI ITCRREDNMK EIILKLDAEK RQRIYVVDGE GNLDGLITLR
401: DIIAKLVYEP PGYFGDFFNG VIPMPQNSRV
101: NGAPVRNVEA PEDASWIDRY IGIVEFAGIA VWLLHQSETS AAALGADEVA AKLGTVTLDP ELKPAAPASE AEGAVAEAFG SLPSSELFRK TKVKDISGSF
201: RWAPFLALQS SDTFLTMLLL LSKYRMKSLP VVDIGEGTIS NMVTQAAVVH MLAECVGLSW FEDWGTKTLA ELGLPLMKTS RLVKVCEDDP ALKAFRQMRR
301: RGVGGIPVVD GAGKPVGSIM IKDVKHLLTA SESTGHYRTL TAREFIASAR QSSGEKQMSI ITCRREDNMK EIILKLDAEK RQRIYVVDGE GNLDGLITLR
401: DIIAKLVYEP PGYFGDFFNG VIPMPQNSRV
001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
Arabidopsis Description
KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.