Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G226700.1 | Wheat | nucleus | 91.36 | 92.27 |
| TraesCS3B01G257800.1 | Wheat | plastid | 90.86 | 91.54 |
| Os01t0633400-01 | Rice | nucleus | 71.85 | 71.5 |
| KXG32947 | Sorghum | cytosol | 68.64 | 67.31 |
| Zm00001d044124_P001 | Maize | cytosol | 66.67 | 66.34 |
| GSMUA_Achr2P09000_001 | Banana | cytoskeleton, cytosol, peroxisome | 41.98 | 42.39 |
| KRH60826 | Soybean | nucleus | 33.09 | 38.73 |
| KRH51517 | Soybean | nucleus | 38.52 | 35.78 |
| VIT_03s0038g04580.t01 | Wine grape | cytosol, golgi, peroxisome, plastid | 39.01 | 35.11 |
| TraesCS3D01G425000.1 | Wheat | peroxisome | 24.44 | 23.02 |
| TraesCS2D01G280600.1 | Wheat | cytosol | 23.7 | 22.59 |
| TraesCS2D01G185000.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.23 | 18.98 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G224700.1 | EnsemblPlantsGene:TraesCS3D01G224700 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF22 | PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 |
| MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:305879899..305882098
Molecular Weight (calculated)
44192.7 Da
IEP (calculated)
5.445
GRAVY (calculated)
-0.028
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMATVAAPA AGRSGGATTA SGEYWSEALK SFLDHIPVSS LSGALQSSPS PALELNLDAC VLDAIGSMRP ANAGGAVIVD EVHRSLGKFV DRDIGYVDLP
101: SLVLWALEEL DRVSTERQDK SSDFLSSLKL HPQIAETKIA WLAKLFLLEP FFPVRSHDTL FHAMLLFSKH HRLNVIPVVE SVNSSVDGFV TQNAVMELLL
201: QSSGLEWLDK IADKQLSVFR FANASKPVLV YSDEIVAYAF GVLSKEKTGV AVIDRKTRRL IGMIQCSDVY LLLDDSSLFS NRKIMSAEEF VKLKNKDDKC
301: STEHSSESEG QSVPSLRSRV QQPVVTHRRS DTLKQAMENL AASGSSCSFI VDEQGHVEGV VAPRDIISVF SPPCMDSRID GGTFFSAALE QAGCRVENGQ
401: IIRNT
101: SLVLWALEEL DRVSTERQDK SSDFLSSLKL HPQIAETKIA WLAKLFLLEP FFPVRSHDTL FHAMLLFSKH HRLNVIPVVE SVNSSVDGFV TQNAVMELLL
201: QSSGLEWLDK IADKQLSVFR FANASKPVLV YSDEIVAYAF GVLSKEKTGV AVIDRKTRRL IGMIQCSDVY LLLDDSSLFS NRKIMSAEEF VKLKNKDDKC
301: STEHSSESEG QSVPSLRSRV QQPVVTHRRS DTLKQAMENL AASGSSCSFI VDEQGHVEGV VAPRDIISVF SPPCMDSRID GGTFFSAALE QAGCRVENGQ
401: IIRNT
001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
Arabidopsis Description
KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.