Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G226700.1 | Wheat | nucleus | 91.04 | 91.27 |
| TraesCS3D01G224700.1 | Wheat | nucleus | 91.54 | 90.86 |
| Os01t0633400-01 | Rice | nucleus | 71.64 | 70.76 |
| KXG32947 | Sorghum | cytosol | 68.41 | 66.59 |
| Zm00001d044124_P001 | Maize | cytosol | 66.67 | 65.85 |
| GSMUA_Achr2P09000_001 | Banana | cytoskeleton, cytosol, peroxisome | 44.03 | 44.14 |
| KRH60826 | Soybean | nucleus | 33.33 | 38.73 |
| VIT_03s0038g04580.t01 | Wine grape | cytosol, golgi, peroxisome, plastid | 40.8 | 36.44 |
| KRH51517 | Soybean | nucleus | 39.3 | 36.24 |
| TraesCS3B01G467600.1 | Wheat | peroxisome | 24.63 | 22.5 |
| TraesCS2B01G299000.1 | Wheat | cytosol | 22.64 | 21.41 |
| TraesCS2B01G203900.2 | Wheat | cytosol, peroxisome, plasma membrane | 21.39 | 18.98 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G257800.1 | EnsemblPlantsGene:TraesCS3B01G257800 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF22 | PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 |
| MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:415897671..415899425
Molecular Weight (calculated)
44209.7 Da
IEP (calculated)
5.901
GRAVY (calculated)
-0.071
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVAAPAAG RSGGAMASGE YWTEALKSFL DHIPVSSLSG ALQPSTSPAL ELNLDACVLD AIGSMRCANA GGAVIVDEVR RSLGKFVDRD IGYVDFPSLV
101: LWALEELDRV STERQDKSSD FFSSLKLHPQ IAETKIAWLA KLFLLEPFFP VRSHDTLFHA MLLFSKHHRL NVIPVVESVN SSVDGFVTQN AVMELLLQSS
201: GLEWLDKIAD KQLSEFRFAN ASKPVLVYSD ETVAYTFRVL SKEKTGVAVI DRKNRRLIGM IQCSDVYLLL DDSSLFSNRK IMSAEEFVKL KNKDQKSRTG
301: HSSESEVQSV PSLRSRVQQS VVTNRWSDTL KQAMENLAAS GSSCSFIVDE QGHVEGVVTP RDVISVFSPP CMDSRIDGGT FFSAALEQAG CRVENGQMIR
401: NT
101: LWALEELDRV STERQDKSSD FFSSLKLHPQ IAETKIAWLA KLFLLEPFFP VRSHDTLFHA MLLFSKHHRL NVIPVVESVN SSVDGFVTQN AVMELLLQSS
201: GLEWLDKIAD KQLSEFRFAN ASKPVLVYSD ETVAYTFRVL SKEKTGVAVI DRKNRRLIGM IQCSDVYLLL DDSSLFSNRK IMSAEEFVKL KNKDQKSRTG
301: HSSESEVQSV PSLRSRVQQS VVTNRWSDTL KQAMENLAAS GSSCSFIVDE QGHVEGVVTP RDVISVFSPP CMDSRIDGGT FFSAALEQAG CRVENGQMIR
401: NT
001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
Arabidopsis Description
KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.