Factsheet for Zm00001d044124_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32947	Sorghum	cytosol	90.91	89.59
Os01t0633400-01	Rice	nucleus	71.25	71.25
TraesCS3A01G226700.1	Wheat	nucleus	67.32	68.33
TraesCS3B01G257800.1	Wheat	plastid	65.85	66.67
TraesCS3D01G224700.1	Wheat	nucleus	66.34	66.67
GSMUA_Achr2P09000_001	Banana	cytoskeleton, cytosol, peroxisome	42.26	42.89
KRH60826	Soybean	nucleus	32.43	38.15
KRH51517	Soybean	nucleus	39.07	36.47
VIT_03s0038g04580.t01	Wine grape	cytosol, golgi, peroxisome, plastid	40.29	36.44
Zm00001d004006_P001	Maize	cytosol, extracellular	22.85	21.99
Zm00001d012019_P001	Maize	peroxisome	22.36	20.82
Zm00001d044315_P004	Maize	cytosol	22.36	20.18

Protein Annotations

EnsemblPlants:Zm00001d044124_P001	EnsemblPlants:Zm00001d044124_T001	EnsemblPlantsGene:Zm00001d044124	EntrezGene:103651458	Gene3D:3.10.580.10	InterPro:CBS_dom
InterPro:IPR000644	ncoils:Coil	PANTHER:PTHR13780	PANTHER:PTHR13780:SF22	PFAM:PF00571	PFscan:PS51371
ProteinID:AAM22634.1	ProteinID:ONM39962.1	SEG:seg	SMART:SM00116	SUPFAM:SSF54631	UniParc:UPI00000A016F
UniProt:Q8LSK1	MapMan:18.4.5.1.3	MapMan:27.3.1.3	:	:	:

Description

polypeptide: yz1 polypeptide

Coordinates

chr3:-:219881372..219884221

Molecular Weight (calculated)

44510.1 Da

IEP (calculated)

5.432

GRAVY (calculated)

-0.016

Length

407 amino acids

Sequence
(BLAST)

001: MAREAASEAT ASRESGAEAA GECWSEALKS FLDHIPVSSV PGALQPTASP AVEVKLHGSV LGALDAMYSS NAAGAVIIDV VHSSLGKYVD RDIGFVEFSS
101: LVLWALEELG KVESEPTDST SDFLSTLKQH HQIAETKIAW LAKLFLWEPF FPVRTHDTLF HAMLLFSKHH RLNVAPVVES MNSSVIGFVT QDAVMELLLQ
201: SSGLEWLDKI ADKQLSEFRF ANVRKPVLVY SDQTLADGLH ILSKEKTGVA VIDRKTSRLI GSLQCSDLYL FLDDSTLFSK RTTTTLEELI SLNNKTDRKC
301: STAENSCAPG RNILALRSRQ SGMVGLPATN LESDTLKQAM EKLTTLRSSC SFIVDEHGRV QGVVTTRDII SVFSPLCMDS RIDGATFFSA ALEQAGCRVE
401: NGQMFQN

Best Arabidopsis Sequence Match ( AT3G48530.1 )
(BLAST)

001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV

Arabidopsis Description

KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.