Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- plastid 1
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G226700.1 | Wheat | nucleus | 44.14 | 44.14 |
| TraesCS3B01G257800.1 | Wheat | plastid | 44.14 | 44.03 |
| Os01t0633400-01 | Rice | nucleus | 44.39 | 43.73 |
| KXG32947 | Sorghum | cytosol | 44.89 | 43.58 |
| Zm00001d044124_P001 | Maize | cytosol | 42.89 | 42.26 |
| TraesCS3D01G224700.1 | Wheat | nucleus | 42.39 | 41.98 |
| KRH60826 | Soybean | nucleus | 34.16 | 39.6 |
| KRH51517 | Soybean | nucleus | 41.9 | 38.53 |
| VIT_03s0038g04580.t01 | Wine grape | cytosol, golgi, peroxisome, plastid | 41.9 | 37.33 |
| GSMUA_Achr7P23930_001 | Banana | cytosol | 23.44 | 21.27 |
| GSMUA_AchrUn_... | Banana | extracellular, vacuole | 20.95 | 19.27 |
| GSMUA_Achr3P19540_001 | Banana | nucleus | 20.95 | 9.76 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P09000_001 | EnsemblPlants:GSMUA_Achr2T09000_001 | EnsemblPlantsGene:GSMUA_Achr2G09000_001 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 |
| PANTHER:PTHR13780 | PANTHER:PTHR13780:SF22 | PFAM:PF00571 | PFscan:PS51371 | SMART:SM00116 | SUPFAM:SSF54631 |
| UniParc:UPI0002957F3C | UniProt:M0S6E1 | MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | : | : |
Description
Putative SNF1-related protein kinase regulatory subunit gamma 1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G09000_001]
Coordinates
chr2:-:12825877..12827779
Molecular Weight (calculated)
44683.5 Da
IEP (calculated)
5.469
GRAVY (calculated)
-0.100
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPGARGDGD SDRKEDSGSV LQSFFDHIPI TAIPGIRGSV PVLEVKFDDC VAHAIRLLYE NNVSGAAIID PADSASKKSM DRDIGFIEFS SMVLWSLEEI
101: DKARAASKEG NHGFFDTLEK YYQIGQTKII ELTKSFLWEP FFPAHEDDTL FHVLLLFTKH HKLNVIPVIE SSNSSIVGFI TQHAVIQLLL QSSGLEWFDE
201: IAEKSLSEYR LMNAAGVVSV FSDQSLADAV HVLWDKQLDG VLVVDRRSGT LLGCVRRSDI YLLLEDDSLF IRRKTFAVEE FIKVRYAASE QSRNRYTETE
301: APPAGLLRMK NARFLRLSNP AVLRKSDSLK KTMEIMAASM RESGFLDGDA GRLEGMVTLR DVILPFSPPS MDARVDGGGF FTSVLNQVGC HVNDGVMIRN
401: R
101: DKARAASKEG NHGFFDTLEK YYQIGQTKII ELTKSFLWEP FFPAHEDDTL FHVLLLFTKH HKLNVIPVIE SSNSSIVGFI TQHAVIQLLL QSSGLEWFDE
201: IAEKSLSEYR LMNAAGVVSV FSDQSLADAV HVLWDKQLDG VLVVDRRSGT LLGCVRRSDI YLLLEDDSLF IRRKTFAVEE FIKVRYAASE QSRNRYTETE
301: APPAGLLRMK NARFLRLSNP AVLRKSDSLK KTMEIMAASM RESGFLDGDA GRLEGMVTLR DVILPFSPPS MDARVDGGGF FTSVLNQVGC HVNDGVMIRN
401: R
001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
Arabidopsis Description
KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.