Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51517 | Soybean | nucleus | 71.97 | 57.11 |
| GSMUA_Achr2P09000_001 | Banana | cytoskeleton, cytosol, peroxisome | 39.6 | 34.16 |
| Os01t0633400-01 | Rice | nucleus | 39.88 | 33.91 |
| TraesCS3B01G257800.1 | Wheat | plastid | 38.73 | 33.33 |
| TraesCS3A01G226700.1 | Wheat | nucleus | 38.44 | 33.17 |
| TraesCS3D01G224700.1 | Wheat | nucleus | 38.73 | 33.09 |
| KXG32947 | Sorghum | cytosol | 39.02 | 32.69 |
| VIT_03s0038g04580.t01 | Wine grape | cytosol, golgi, peroxisome, plastid | 42.49 | 32.67 |
| Zm00001d044124_P001 | Maize | cytosol | 38.15 | 32.43 |
| KRH63760 | Soybean | cytosol | 21.68 | 18.25 |
| KRH57227 | Soybean | cytosol | 22.83 | 18.12 |
| KRH03956 | Soybean | peroxisome | 22.83 | 17.79 |
| KRH54191 | Soybean | nucleus | 21.39 | 16.97 |
| KRH74794 | Soybean | cytosol | 21.68 | 16.93 |
| KRH69332 | Soybean | endoplasmic reticulum, vacuole | 22.25 | 15.94 |
Protein Annotations
| EMBL:ACUP02002140 | EnsemblPlants:KRH60826 | EnsemblPlantsGene:GLYMA_04G012000 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 |
| PANTHER:PTHR13780 | PANTHER:PTHR13780:SF22 | PFAM:PF00571 | PFscan:PS51371 | ProteinID:KRH60826 | ProteinID:KRH60826.1 |
| SUPFAM:SSF54631 | UniParc:UPI0006EDBE52 | UniProt:A0A0R0K1Z8 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr4:+:899581..901536
Molecular Weight (calculated)
38831.1 Da
IEP (calculated)
4.682
GRAVY (calculated)
-0.192
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSRKIADVL KVSEGGLEDK KQKNRSSSLH KDDNQNQHVQ IDSGFALQQF LDHIPIISIA GIKNSPVLEL KAGDSIMDAI HMLYENDIFS AAIVDMSDIR
101: FSDRYIGLID FTSMVLWCLE NNGFFSILDQ VPQIGQTKVS ESAKSFLYEP FFPVSMDDTV LHALLLLSKH RVHVLPVIQE PEAGFIGFAT QNAVVEHLLQ
201: SSELEWFDNI ADKNLSDFRF ESQENPSCVY GDQTVANALD MLWQNQTCPV AVVDRQTKKL LETDKVETER AIEHDHGVFL TAGSLQLKNS FIPRMDLPVA
301: NKENETLNLQ FAPPNMNSSI NGGGFFEFVL EQSGCQVKYG AIIHNH
101: FSDRYIGLID FTSMVLWCLE NNGFFSILDQ VPQIGQTKVS ESAKSFLYEP FFPVSMDDTV LHALLLLSKH RVHVLPVIQE PEAGFIGFAT QNAVVEHLLQ
201: SSELEWFDNI ADKNLSDFRF ESQENPSCVY GDQTVANALD MLWQNQTCPV AVVDRQTKKL LETDKVETER AIEHDHGVFL TAGSLQLKNS FIPRMDLPVA
301: NKENETLNLQ FAPPNMNSSI NGGGFFEFVL EQSGCQVKYG AIIHNH
001: MKKNLYFRYK PDVIKGDMDS IRRDVLDFYI NLGTKVIDES HDQDTTDLDK CILYIRHSTL NQETSGLQIL ATGALGGRFD HEAGNLNVLY RYPDTRIVLL
101: SDDCLIQLLP KTHRHEIHIQ SSLEGPHCGL IPIGTPSAKT TTSGLQWDLS NTEMRFGGLI STSNLVKEEK ITVESDSDLL WTISIKKTGL SIQDHTP
101: SDDCLIQLLP KTHRHEIHIQ SSLEGPHCGL IPIGTPSAKT TTSGLQWDLS NTEMRFGGLI STSNLVKEEK ITVESDSDLL WTISIKKTGL SIQDHTP
Arabidopsis Description
TPK1thiamin pyrophosphokinase1 [Source:TAIR;Acc:AT1G02880]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.