CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60826	Soybean	nucleus	57.11	71.97
VIT_03s0038g04580.t01	Wine grape	cytosol, golgi, peroxisome, plastid	45.87	44.44
GSMUA_Achr2P09000_001	Banana	cytoskeleton, cytosol, peroxisome	38.53	41.9
Os01t0633400-01	Rice	nucleus	38.53	41.28
TraesCS3A01G226700.1	Wheat	nucleus	36.47	39.65
TraesCS3B01G257800.1	Wheat	plastid	36.24	39.3
Zm00001d044124_P001	Maize	cytosol	36.47	39.07
KXG32947	Sorghum	cytosol	36.93	38.98
TraesCS3D01G224700.1	Wheat	nucleus	35.78	38.52
KRH57227	Soybean	cytosol	23.39	23.39
KRH03956	Soybean	peroxisome	22.71	22.3
KRH63760	Soybean	cytosol	20.87	22.14
KRH54191	Soybean	nucleus	21.1	21.1
KRH74794	Soybean	cytosol	21.1	20.77
KRH69332	Soybean	endoplasmic reticulum, vacuole	21.56	19.46

Protein Annotations

EMBL:ACUP02003379	EnsemblPlants:KRH51517	EnsemblPlantsGene:GLYMA_06G011800	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644
PANTHER:PTHR13780	PANTHER:PTHR13780:SF22	PFAM:PF00571	PFscan:PS51371	ProteinID:KRH51517	ProteinID:KRH51517.1
SEG:seg	SMART:SM00116	SUPFAM:SSF54631	UniParc:UPI00023395EB	UniProt:K7KSG4	MapMan:18.4.5.1.3
MapMan:27.3.1.3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:878395..881263

Molecular Weight (calculated)

48791.9 Da

IEP (calculated)

4.981

GRAVY (calculated)

-0.238

Length

436 amino acids

Sequence
(BLAST)

001: MQSRKIADVL NVSDGGRGLE NKEKNLSSNL HNDHDNQNQH VQIDSGSALQ QFLDHIPISA IAGIKNSPVL ELKAGDSIRD AIHALYKKDI FSAAIVDTSD
101: SHAGSIRFSD RYIGLIDFTS MVLWCLEEFD KIKNDTMENH LMDLENDGLF SILDQVPQIG LTKVSELAKS FLWEPFFPVN MDDTVLHALL LLSKHRVHVL
201: PVIQEPQAGL IGYVTQNAVV QHLLQSSELE WFDSIADKNI SDFRFESQEN PSCVYGDQTV ANALDLLWQN QTCAVAVVDR QTKKLVGNVR NGDVYNLVKN
301: NDLLRNRSIL TVKEFIHIET DKVVTEQAIE HDHGALLTAG SLRLKNSFIP RMDLPVANKE TETLKQIMEH TTETNSSFSF LINDNEQVTG LLTLRDIILQ
401: FAPPNMNSSI NGGGFFEFAL EQSGCQVKNG TMVRNH

Best Arabidopsis Sequence Match ( AT3G48530.1 )
(BLAST)

001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV

Arabidopsis Description

KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.