Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- golgi 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51517 | Soybean | nucleus | 44.44 | 45.87 |
| KRH60826 | Soybean | nucleus | 32.67 | 42.49 |
| GSMUA_Achr2P09000_001 | Banana | cytoskeleton, cytosol, peroxisome | 37.33 | 41.9 |
| KXG32947 | Sorghum | cytosol | 37.78 | 41.16 |
| TraesCS3B01G257800.1 | Wheat | plastid | 36.44 | 40.8 |
| Os01t0633400-01 | Rice | nucleus | 36.44 | 40.29 |
| Zm00001d044124_P001 | Maize | cytosol | 36.44 | 40.29 |
| TraesCS3A01G226700.1 | Wheat | nucleus | 35.78 | 40.15 |
| TraesCS3D01G224700.1 | Wheat | nucleus | 35.11 | 39.01 |
| VIT_17s0000g01460.t01 | Wine grape | peroxisome | 20.0 | 20.93 |
| VIT_01s0026g01740.t01 | Wine grape | cytosol | 19.56 | 19.82 |
Protein Annotations
| ArrayExpress:VIT_03s0038g04580 | EMBL:FN596508 | EnsemblPlants:VIT_03s0038g04580.t01 | EnsemblPlantsGene:VIT_03s0038g04580 | Gene3D:3.10.580.10 | InterPro:CBS_dom |
| InterPro:IPR000644 | PANTHER:PTHR13780 | PANTHER:PTHR13780:SF22 | PFscan:PS51371 | ProteinID:CCB60480 | ProteinID:CCB60480.1 |
| SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 | UniParc:UPI00021094B7 | UniProt:F6I0L4 | MapMan:18.4.5.1.3 |
| MapMan:27.3.1.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:3358910..3361445
Molecular Weight (calculated)
50401.5 Da
IEP (calculated)
5.765
GRAVY (calculated)
-0.012
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLGQVEEVV LLRRKMPSSL NPPTNSTLAL PSKSFLITSQ SAPFPAFKIH SLVPILFVCV YIRGVPFLFD SFDTLVEIWI SFSQVLELKT GDSVRDAIHF
101: LYEKNVLGAP IADVLESSDD SNAISRRFSD QYVGFIDFAS MVLWSLEESE KAEGDGNYNI GNNGIFSMLD QNPHIGQTKI GVLAKSFLWD PFFPITLDDS
201: LMHVLLLLST HRLQILPVME QPNSKVIGFV TQNAVIQLLL QSSGLEWFDN LADKALSEFR YSNSLSFRFA NQSIAEGFHV LWKNRTCPIA VLNRENKRLI
301: GSLRSSDIHL LLDNDDLFHG RKTRTIEEFI HLDARKSHAD ASIEGDLGAL VSAGILRLRN SVLPRMDWPV TNRKTDTLKQ AMKNLAETRS NFSFLVDELQ
401: HLTGVLTVRD MITQFAPPCV DSRFTGGGFF ESALEQSGCQ VKNGTLVCDH
101: LYEKNVLGAP IADVLESSDD SNAISRRFSD QYVGFIDFAS MVLWSLEESE KAEGDGNYNI GNNGIFSMLD QNPHIGQTKI GVLAKSFLWD PFFPITLDDS
201: LMHVLLLLST HRLQILPVME QPNSKVIGFV TQNAVIQLLL QSSGLEWFDN LADKALSEFR YSNSLSFRFA NQSIAEGFHV LWKNRTCPIA VLNRENKRLI
301: GSLRSSDIHL LLDNDDLFHG RKTRTIEEFI HLDARKSHAD ASIEGDLGAL VSAGILRLRN SVLPRMDWPV TNRKTDTLKQ AMKNLAETRS NFSFLVDELQ
401: HLTGVLTVRD MITQFAPPCV DSRFTGGGFF ESALEQSGCQ VKNGTLVCDH
001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
Arabidopsis Description
KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.