Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G425000.1 | Wheat | peroxisome | 87.73 | 89.77 |
| TraesCS3A01G429700.1 | Wheat | peroxisome | 86.59 | 88.81 |
| HORVU3Hr1G094560.3 | Barley | cytosol, mitochondrion, peroxisome | 88.64 | 88.24 |
| EES04118 | Sorghum | cytosol | 75.91 | 76.08 |
| Zm00001d012019_P001 | Maize | peroxisome | 73.18 | 73.68 |
| Os01t0921500-01 | Rice | plasma membrane, plastid | 71.36 | 72.18 |
| TraesCS2B01G299000.1 | Wheat | cytosol | 54.09 | 56.0 |
| TraesCS2B01G203900.2 | Wheat | cytosol, peroxisome, plasma membrane | 28.64 | 27.81 |
| TraesCS3B01G257800.1 | Wheat | plastid | 22.5 | 24.63 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G467600.1 | EnsemblPlantsGene:TraesCS3B01G467600 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF93 | PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 |
| TIGR:cd04642 | MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:710586793..710588191
Molecular Weight (calculated)
47708.1 Da
IEP (calculated)
4.970
GRAVY (calculated)
-0.111
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MQARREIRTK PEQREEEDAA SAVAETPLSA RWSPEAEIGM RVEDIWDSLD QPQLSRSDKL NSCFDAIAVS SFPQTFGAQL VDIPSDATLA EAVDILSRNR
101: INGAPVRNVE APEDASWIDR YIGIVEFAGI AVWLLHRSEA SASAAALGAD ELAAKLGTVT LDGGSGGGGG GARELKAATE AEGAVAEAFG SLPSSELFRK
201: TKVKDISGSF RWAPFLALQS SDTFLTMLLL LSKYRMKSLP VVDIGEGTIS NMVTQAAVVH MLAECVGLSW FEDWGTKTLA ELGLPLMKTS RLVKVCEDEP
301: ALKAFRQMRR RGVGGIPVVD GAGKPVGSIM IKDVKHLLTA SESAGHYRTL TAREFIASAR QSSGEKQMSI ITCTREDNMK EIILKLDAEK RQRIYVVDGE
401: GNLDGLITLR DIIAKLVYEP PGYFGDFFNG VIPMPQNSRV
101: INGAPVRNVE APEDASWIDR YIGIVEFAGI AVWLLHRSEA SASAAALGAD ELAAKLGTVT LDGGSGGGGG GARELKAATE AEGAVAEAFG SLPSSELFRK
201: TKVKDISGSF RWAPFLALQS SDTFLTMLLL LSKYRMKSLP VVDIGEGTIS NMVTQAAVVH MLAECVGLSW FEDWGTKTLA ELGLPLMKTS RLVKVCEDEP
301: ALKAFRQMRR RGVGGIPVVD GAGKPVGSIM IKDVKHLLTA SESAGHYRTL TAREFIASAR QSSGEKQMSI ITCTREDNMK EIILKLDAEK RQRIYVVDGE
401: GNLDGLITLR DIIAKLVYEP PGYFGDFFNG VIPMPQNSRV
001: MAGSEAVEDK EIKSAVSSCE AYFEKVQSRK NLPKSLQETL NSAFAGIPVS SFPQVPGGRV IEIQAETPVS EAVKILSDSK ILSAPVINTD HESSLDWRER
101: YLGIIDYSSI ILWVLESAEL AAIALSATSA TAAGVGAGAV GALGVAALGM TGPVAAAGLA AAAVGAAVAG GVAAERGIGK DAPTAADKLG KDFYEVILQE
201: EPFKSTTVRT ILKSFRWAPF LPVSTESSML SVMLLLSKYR LRNVPVIKTG EPDIKNYVTQ SAVVHGLEGC KGRDWFDHIS ALPISDLGLP FMSPNEVISI
301: ESEELILEAF KRMRDNNIGG LPVVEGLNKK IVGNISMRDI RYLLLQPEVF SNFRQLTVKS FATKIATAGE EYGLAIPAIT CRPDSTLGSV INSLASRSVH
401: RVYVAAGDEN ELYGVITLRD VISCFVSEPP NYFENCLGFS VKEMLNR
101: YLGIIDYSSI ILWVLESAEL AAIALSATSA TAAGVGAGAV GALGVAALGM TGPVAAAGLA AAAVGAAVAG GVAAERGIGK DAPTAADKLG KDFYEVILQE
201: EPFKSTTVRT ILKSFRWAPF LPVSTESSML SVMLLLSKYR LRNVPVIKTG EPDIKNYVTQ SAVVHGLEGC KGRDWFDHIS ALPISDLGLP FMSPNEVISI
301: ESEELILEAF KRMRDNNIGG LPVVEGLNKK IVGNISMRDI RYLLLQPEVF SNFRQLTVKS FATKIATAGE EYGLAIPAIT CRPDSTLGSV INSLASRSVH
401: RVYVAAGDEN ELYGVITLRD VISCFVSEPP NYFENCLGFS VKEMLNR
Arabidopsis Description
Cystathionine beta-synthase (CBS) protein [Source:TAIR;Acc:AT1G69800]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.