Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012019_P001 | Maize | peroxisome | 87.24 | 87.64 |
| HORVU3Hr1G094560.3 | Barley | cytosol, mitochondrion, peroxisome | 77.9 | 77.38 |
| TraesCS3A01G429700.1 | Wheat | peroxisome | 74.72 | 76.46 |
| TraesCS3D01G425000.1 | Wheat | peroxisome | 74.49 | 76.05 |
| TraesCS3B01G467600.1 | Wheat | peroxisome | 76.08 | 75.91 |
| Os01t0921500-01 | Rice | plasma membrane, plastid | 74.03 | 74.71 |
| KXG26065 | Sorghum | cytosol | 56.04 | 58.16 |
| EES03176 | Sorghum | cytosol, peroxisome, plasma membrane | 27.33 | 26.61 |
| KXG32947 | Sorghum | cytosol | 21.64 | 23.0 |
Protein Annotations
| EnsemblPlants:EES04118 | EnsemblPlantsGene:SORBI_3003G405800 | EntrezGene:8079804 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 |
| PANTHER:PTHR13780 | PANTHER:PTHR13780:SF93 | PFAM:PF00571 | PFscan:PS51371 | ProteinID:EES04118 | ProteinID:EES04118.1 |
| RefSeq:XP_002458998.1 | SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 | UniParc:UPI0001A855B9 | UniProt:C5XGB5 |
| MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:71287602..71289613
Molecular Weight (calculated)
47706.3 Da
IEP (calculated)
5.116
GRAVY (calculated)
0.027
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAVRTRPEQ LAAEAAVVEA TPHGSARSWS PEAEIGMRVE DIWDSLDVQQ RQLSHGDKLN SCFDSIPVAS FPHTFDGAQL VEIPSDATLA EAVDILSRNR
101: IISAPVRNVD APEDASWIDR YIGIVEFAGI AVWLLHQSEA AAKADDVGAD ELAAKLGTVT LEGAVAAAAV ASKVAAAAES EGAIAEVFGA LPSSDLFNKT
201: KVKDISGSFR WAPFLALQSS DTFLTMLLLL SKYRMKSLPV VDIGEGTISN IITQAAVVHM LSECVGLLWF EEWGTKTLSE IGLPIMRLSK IVKVREDEPA
301: LKAFRLMRRK GVGGIPVVDD SGRAVGSIMI KDVKHLLTAS ETNRDYRTLT AKKFIANARQ SSGERQMSII TCSRGDSIKD IILKLDAEKR QRIYVINEEG
401: NLDGLITLRD IIAKLVYEPP GYFGDFFNGV IPLPSNSRV
101: IISAPVRNVD APEDASWIDR YIGIVEFAGI AVWLLHQSEA AAKADDVGAD ELAAKLGTVT LEGAVAAAAV ASKVAAAAES EGAIAEVFGA LPSSDLFNKT
201: KVKDISGSFR WAPFLALQSS DTFLTMLLLL SKYRMKSLPV VDIGEGTISN IITQAAVVHM LSECVGLLWF EEWGTKTLSE IGLPIMRLSK IVKVREDEPA
301: LKAFRLMRRK GVGGIPVVDD SGRAVGSIMI KDVKHLLTAS ETNRDYRTLT AKKFIANARQ SSGERQMSII TCSRGDSIKD IILKLDAEKR QRIYVINEEG
401: NLDGLITLRD IIAKLVYEPP GYFGDFFNGV IPLPSNSRV
001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
Arabidopsis Description
KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.