Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G425000.1 | Wheat | peroxisome | 94.87 | 94.65 |
| TraesCS3B01G467600.1 | Wheat | peroxisome | 88.81 | 86.59 |
| HORVU3Hr1G094560.3 | Barley | cytosol, mitochondrion, peroxisome | 88.58 | 85.97 |
| Os01t0921500-01 | Rice | plasma membrane, plastid | 76.22 | 75.17 |
| EES04118 | Sorghum | cytosol | 76.46 | 74.72 |
| Zm00001d012019_P001 | Maize | peroxisome | 73.66 | 72.31 |
| TraesCS2A01G281700.1 | Wheat | cytosol | 55.24 | 55.76 |
| TraesCS2A01G177000.1 | Wheat | cytosol, peroxisome, plasma membrane | 29.14 | 27.59 |
| TraesCS3A01G226700.1 | Wheat | nucleus | 23.08 | 24.69 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G429700.1 | EnsemblPlantsGene:TraesCS3A01G429700 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF93 | PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 |
| TIGR:cd02205 | TIGR:cd04642 | MapMan:18.4.5.1.3 | MapMan:27.3.1.3 | : | : |
Description
No Description!
Coordinates
chr3A:-:672550169..672551536
Molecular Weight (calculated)
46993.4 Da
IEP (calculated)
4.885
GRAVY (calculated)
-0.129
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MQARREIRTK PEQRGEEDAA AAETPLSARW SPEAEIGMRV EDIWDSLDQP QLSRSDKLNS CFDAIPVSSF PQTFGSQLVD IPSDATLAEA VDILSRNRIN
101: GAPVRNVEAP EDASWIDRYI GIVEFAGIAV WLLHQSETSA AALGADEMAA KLGTVTLDPE LKPAAPASEA EGAVAEAFGS LPSSELFRKT KVKDISGSFR
201: WAPFLALQSS DTFLTMLLLL SKYRMKSLPV VDIGEGTISN MVTQAAVVHM LSECVGLSWF EDWGTKTLAE LGLPLMKTSR LVKVCEDDPA LKAFRQMRRR
301: GVGGIPVVDA AGKPVGSIMI KDVKHLLTAS ESTGHYRTLT AREFIASARQ CSGEKQMSII TCTREDNMKE IILKLDAEKR QRIYVVDGEG NLDGLITLRD
401: IIAKLVYEPP GYFGDFFNGV IPMPQNSRV
101: GAPVRNVEAP EDASWIDRYI GIVEFAGIAV WLLHQSETSA AALGADEMAA KLGTVTLDPE LKPAAPASEA EGAVAEAFGS LPSSELFRKT KVKDISGSFR
201: WAPFLALQSS DTFLTMLLLL SKYRMKSLPV VDIGEGTISN MVTQAAVVHM LSECVGLSWF EDWGTKTLAE LGLPLMKTSR LVKVCEDDPA LKAFRQMRRR
301: GVGGIPVVDA AGKPVGSIMI KDVKHLLTAS ESTGHYRTLT AREFIASARQ CSGEKQMSII TCTREDNMKE IILKLDAEKR QRIYVVDGEG NLDGLITLRD
401: IIAKLVYEPP GYFGDFFNGV IPMPQNSRV
001: MATVPEIKIM RSESLGHRSD VSSPEAKLGM RVEDLWDEQK PQLSPNEKLN ACFESIPVSA FPLSSDSQDI EIRSDTSLAE AVQTLSKFKV LSAPVVDVDA
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
101: PEDASWIDRY IGIVEFPGIV VWLLHQLEPP SPRSPAVAAS NGFSHDFTTD VLDNGDSAVT SGNFFEVLTS SELYKNTKVR DISGTFRWAP FLALQKENSF
201: LTMLLLLSKY KMKSIPVVDL GVAKIENIIT QSGVIHMLAE CAGLLWFEDW GIKTLSEVGL PIMSKDHIIK IYEDEPVLQA FKLMRRKRIG GIPVIERNSE
301: KPVGNISLRD VQFLLTAPEI YHDYRSITTK NFLVSVREHL EKCGDTSAPI MSGVIACTKN HTLKELILML DAEKIHRIYV VDDFGNLEGL ITLRDIIARL
401: VHEPSGYFGD FFDGVMPLPE NYRV
Arabidopsis Description
KING1SNF1-related protein kinase regulatory subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.