Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra039871.1-P | Field mustard | nucleus | 87.59 | 85.47 |
CDY12454 | Canola | nucleus | 76.64 | 81.4 |
CDY02344 | Canola | cytosol | 48.61 | 48.4 |
AT1G30860.1 | Thale cress | cytosol | 48.61 | 45.62 |
CDY09519 | Canola | nucleus | 46.28 | 44.21 |
CDY31650 | Canola | nucleus, plastid | 35.47 | 37.73 |
CDX84276 | Canola | endoplasmic reticulum, extracellular | 32.7 | 33.09 |
VIT_01s0010g00340.t01 | Wine grape | nucleus | 24.67 | 23.18 |
CDX96975 | Canola | cytosol | 22.19 | 22.13 |
KRH37161 | Soybean | nucleus | 29.64 | 22.02 |
GSMUA_Achr4P33210_001 | Banana | nucleus | 17.37 | 21.92 |
KRH12155 | Soybean | nucleus | 27.88 | 20.83 |
GSMUA_Achr7P00390_001 | Banana | nucleus | 19.71 | 18.57 |
CDY50063 | Canola | cytosol | 28.03 | 17.47 |
Solyc10g005220.2.1 | Tomato | nucleus, plastid | 23.8 | 17.3 |
PGSC0003DMT400029374 | Potato | nucleus, plastid | 24.67 | 17.14 |
TraesCS2A01G229600.2 | Wheat | nucleus, plastid | 18.1 | 16.78 |
PGSC0003DMT400035458 | Potato | nucleus | 25.26 | 16.71 |
CDX78978 | Canola | cytosol | 27.3 | 16.52 |
TraesCS2B01G251300.1 | Wheat | nucleus, plastid | 17.52 | 16.35 |
Solyc02g082100.2.1 | Tomato | vacuole | 25.26 | 16.05 |
TraesCS2D01G233500.1 | Wheat | cytosol, plastid | 17.52 | 15.85 |
Zm00001d021532_P001 | Maize | cytosol, plastid | 17.66 | 15.65 |
CDY14941 | Canola | nucleus | 14.16 | 15.62 |
EER99396 | Sorghum | plastid | 17.52 | 15.54 |
HORVU2Hr1G048520.1 | Barley | plastid | 14.31 | 15.24 |
Zm00001d006417_P002 | Maize | plastid | 12.85 | 14.99 |
Os07t0499800-01 | Rice | nucleus | 16.06 | 14.63 |
CDY08599 | Canola | nucleus | 10.66 | 10.1 |
CDY41355 | Canola | nucleus | 10.37 | 9.43 |
CDX70223 | Canola | cytosol | 10.07 | 8.9 |
CDY04520 | Canola | cytosol, plastid | 8.47 | 8.55 |
CDY44857 | Canola | nucleus | 9.64 | 8.49 |
CDY00948 | Canola | cytosol | 8.91 | 8.46 |
CDX71406 | Canola | cytosol | 4.09 | 5.01 |
Os03t0107500-00 | Rice | plasma membrane | 2.04 | 3.84 |
Protein Annotations
EnsemblPlants:CDY52188 | EnsemblPlantsGene:GSBRNA2T00005044001 | Gene3D:3.30.40.10 | GO:A0A078IT13 | InterPro:IPR001841 | InterPro:IPR013083 |
InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF103 | PFAM:PF13920 |
PFscan:PS50089 | ProteinID:CDY52188 | ProteinID:CDY52188.1 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI0004EE6066 |
UniProt:A0A078IT13 | MapMan:35.2 | : | : | : | : |
Description
BnaAnng11290DBnaAnng11290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT13]
Coordinates
chrLK033063:+:55357..57986
Molecular Weight (calculated)
78108.5 Da
IEP (calculated)
4.961
GRAVY (calculated)
-0.943
Length
685 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSQVEIPS PSQRFGFILR DRNQTPIVYK KAPNHQQPVS DENSQNLVDS WIQTLNKKKD NNNARSTEKP IALEKSDESN RNGASSLVQI WEARLLNRST
101: SPSHNQSPVN SSRSDSGVSV QDSRSSESPS IESEAEISDV EIESRSHGGS VSDSCRVADL IRRLSNEAKV ISGGGLSTIR TPRPCVSSWS SSEKSSFPMV
201: TPRIRGRQAF TDLLMHMERD RHRELDSLLE RNAVSRFTQR GRLQSMLRLR NLKRCQAVQE QNRSNSKSTG LNRIGSGGSS VLHLRERFRA DVDKRKDNHF
301: MNKKTVEETE VTSDNKTMKN GGLTLEAFFK ERLSLPNPNL EKATLRKGEE TVNGTVGLKN NCLQLQETIE VEEACCNDDD SDKKEEEKTS PSACVDQETQ
401: PQSVVPESIE VDQCLEQQET SYLNGWEDEE EYEEDEQSYY YGETNNDWLH EISRPRSYWE ELRKTRYLEV MNTRSEKEDI RRLLERGPVT DFLQSGLRDQ
501: IDRLMMSRVQ THSNKHSEKW ELQEEEEEEH RNENPFTEEG EEQDDGDDSS SSPIFASSPA GSWSCQDTEV TSTPVLSVHN PPSPEMELIS EMRTQIQQLQ
601: QEMSLLRDSV KTCLDTNASL VHRENPMKRK CCVCDETQVE AVLYRCGHMC TCLKCANELH WSGGKCPICR AQIMDVVRVF FDTRN
101: SPSHNQSPVN SSRSDSGVSV QDSRSSESPS IESEAEISDV EIESRSHGGS VSDSCRVADL IRRLSNEAKV ISGGGLSTIR TPRPCVSSWS SSEKSSFPMV
201: TPRIRGRQAF TDLLMHMERD RHRELDSLLE RNAVSRFTQR GRLQSMLRLR NLKRCQAVQE QNRSNSKSTG LNRIGSGGSS VLHLRERFRA DVDKRKDNHF
301: MNKKTVEETE VTSDNKTMKN GGLTLEAFFK ERLSLPNPNL EKATLRKGEE TVNGTVGLKN NCLQLQETIE VEEACCNDDD SDKKEEEKTS PSACVDQETQ
401: PQSVVPESIE VDQCLEQQET SYLNGWEDEE EYEEDEQSYY YGETNNDWLH EISRPRSYWE ELRKTRYLEV MNTRSEKEDI RRLLERGPVT DFLQSGLRDQ
501: IDRLMMSRVQ THSNKHSEKW ELQEEEEEEH RNENPFTEEG EEQDDGDDSS SSPIFASSPA GSWSCQDTEV TSTPVLSVHN PPSPEMELIS EMRTQIQQLQ
601: QEMSLLRDSV KTCLDTNASL VHRENPMKRK CCVCDETQVE AVLYRCGHMC TCLKCANELH WSGGKCPICR AQIMDVVRVF FDTRN
001: MVSSPQRFGL ILRDRNQNAG VFQKNLKSPV KEVLKSHVSD ENLVDSWIET HNNKNNRVLE SPLESKRNDN LVASSLVQIW EARLNRSNGG NSPSSSQSTA
101: SSSSRSDSGV SVQDSGLSES SSIDGDSEIA DRTVEIESRS HGLVSDSGES KWGRVADLIR RLSNEDKKRT AGDNGSGGGG GLEIIRTPRP YCTSSSSEKS
201: NFPVVSFSPK IRGRQAFTDF LMQMERDRHR ELDSLFERNA VSRFTQRGRL QSMLRLRNLN RCLVIQDRNR SNAKTTGLNR IESGSAVLHL REKFHANVVN
301: SAAATDKRKN HQRSTEMNNK SVEETEGTTT TSTRLKDGGV TLEAFFAERL RPRNRKIEEA TLCKEEESVS GTVDSQKNCL QLQETREVEE TCNDGKSEKK
401: EEENTSPSEY LSRESRLRQN QDENNVGKYM QETRETEGLV HESNEMDQCL DQQETSYLNR WGEQEEYADE QSYYGEYNDD WLSEIARPRS YWEELRKSRY
501: LEVMNTRSEK DDICRLLERR TVTDFLDSGL REKIDNLMMS RVQTHSDKHS KKWELQQEEE EEVNFEIDEE IKEEPLRGGE EQDDRDDLSQ SSSSHISASS
601: PAGSWSSQDT DVTSTPALVV QNPQSPEMEL ISGMRSQIQQ LQQEMSVLRD SVKTCLDANA SLQHKAHQEN PMKRKCCVCD ETQVEAVLYR CGHMCMCLKC
701: ANELHWSGGK CPICRAQIVD VVRVIYDTRN
101: SSSSRSDSGV SVQDSGLSES SSIDGDSEIA DRTVEIESRS HGLVSDSGES KWGRVADLIR RLSNEDKKRT AGDNGSGGGG GLEIIRTPRP YCTSSSSEKS
201: NFPVVSFSPK IRGRQAFTDF LMQMERDRHR ELDSLFERNA VSRFTQRGRL QSMLRLRNLN RCLVIQDRNR SNAKTTGLNR IESGSAVLHL REKFHANVVN
301: SAAATDKRKN HQRSTEMNNK SVEETEGTTT TSTRLKDGGV TLEAFFAERL RPRNRKIEEA TLCKEEESVS GTVDSQKNCL QLQETREVEE TCNDGKSEKK
401: EEENTSPSEY LSRESRLRQN QDENNVGKYM QETRETEGLV HESNEMDQCL DQQETSYLNR WGEQEEYADE QSYYGEYNDD WLSEIARPRS YWEELRKSRY
501: LEVMNTRSEK DDICRLLERR TVTDFLDSGL REKIDNLMMS RVQTHSDKHS KKWELQQEEE EEVNFEIDEE IKEEPLRGGE EQDDRDDLSQ SSSSHISASS
601: PAGSWSSQDT DVTSTPALVV QNPQSPEMEL ISGMRSQIQQ LQQEMSVLRD SVKTCLDANA SLQHKAHQEN PMKRKCCVCD ETQVEAVLYR CGHMCMCLKC
701: ANELHWSGGK CPICRAQIVD VVRVIYDTRN
Arabidopsis Description
At1g30860 [Source:UniProtKB/TrEMBL;Acc:Q6NQ80]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.