CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96975	Canola	cytosol	42.19	38.14
AT5G44690.1	Thale cress	nucleus	25.44	23.87
CDY31650	Canola	nucleus, plastid	19.0	18.32
CDX84276	Canola	endoplasmic reticulum, extracellular	19.48	17.87
CDY12454	Canola	nucleus	17.23	16.59
CDY02344	Canola	cytosol	17.71	15.99
CDY09519	Canola	nucleus	16.43	14.23
CDY52188	Canola	nucleus	15.62	14.16
GSMUA_Achr4P33210_001	Banana	nucleus	12.08	13.81
VIT_01s0010g00340.t01	Wine grape	nucleus	14.33	12.21
CDX78978	Canola	cytosol	20.61	11.31
CDY50063	Canola	cytosol	19.97	11.28
PGSC0003DMT400029374	Potato	nucleus, plastid	17.39	10.95
Solyc10g005220.2.1	Tomato	nucleus, plastid	16.59	10.93
KRH37161	Soybean	nucleus	16.1	10.85
GSMUA_Achr7P00390_001	Banana	nucleus	12.4	10.59
KRH12155	Soybean	nucleus	15.3	10.36
HORVU2Hr1G048520.1	Barley	plastid	10.47	10.11
TraesCS2A01G229600.2	Wheat	nucleus, plastid	11.59	9.74
Os07t0499800-01	Rice	nucleus	11.59	9.57
TraesCS2D01G233500.1	Wheat	cytosol, plastid	11.59	9.51
TraesCS2B01G251300.1	Wheat	nucleus, plastid	11.11	9.4
EER99396	Sorghum	plastid	11.59	9.33
PGSC0003DMT400035458	Potato	nucleus	15.3	9.18
Zm00001d021532_P001	Maize	cytosol, plastid	11.11	8.93
Solyc02g082100.2.1	Tomato	vacuole	14.49	8.35
Zm00001d006417_P002	Maize	plastid	7.89	8.35
CDY00948	Canola	cytosol	8.53	7.35
CDX70223	Canola	cytosol	8.21	6.58
CDY44857	Canola	nucleus	8.05	6.44
CDY41355	Canola	nucleus	7.73	6.37
CDY08599	Canola	nucleus	7.25	6.22
CDY04520	Canola	cytosol, plastid	6.12	5.6
CDX71406	Canola	cytosol	3.54	3.94
Os03t0107500-00	Rice	plasma membrane	2.09	3.56

Protein Annotations

EnsemblPlants:CDY14941	EnsemblPlantsGene:GSBRNA2T00084876001	PANTHER:PTHR10044	PANTHER:PTHR10044:SF103	ProteinID:CDY14941	ProteinID:CDY14941.1
SEG:seg	UniParc:UPI0004EEFE69	UniProt:A0A078FP95	MapMan:35.2	:	:

Description

BnaA02g22830DBnaA02g22830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FP95]

Coordinates

chrLK032048:-:719347..721791

Molecular Weight (calculated)

71347.9 Da

IEP (calculated)

5.142

GRAVY (calculated)

-0.782

Length

621 amino acids

Sequence
(BLAST)

001: MASLEMVSTK MFECVPSDRS KKEKDLKVLA RDQSDNFRVF PVDDSGSKQD GNEVLECSSR TSVSETEEAQ QIIYSPETNS NAFYNLVETE NPSRNEIIMG
101: ASSLVQIWEA RSRPSSPTRN HFFIDSLFFE SLNDEARNNG DEVDWCLQSN ISDSCEKEKE RESRCSPSSV RIRGRQAFED FLMMILRERK KYLKWIAGLT
201: AVSKFSPRGC ERLQYMLRIR SFERCIAMQE RHLFKSSKRS SRGSGVMNNL RCYKLISNVI QLVFIALQSQ CNDRYKKNIG QPKIANEAVL SEDTSNKNGL
301: KKHETERKYT EEGEGSGETT EKGIVMGSVE TNNTLSIAEK VNLWDSKERS NMGKAKNEGK AARSGIDVEV TEVIDIETDG YRLNPQDVTS MISLEKRKEE
401: ENASRVSRER HTDEMFSKDD GETSKDKKLE ASETLCLVLE SPRFLNGWVK HDMEGEDEYE DYSGESVNYD WVSHISRPRS YWDDLRKERE LEIIKKLSKK
501: DDIFQKLIKE RTVFSFLTSD FRKNIEKILI SRPQKGLEVK GNHVDGEASE ECSAEYQEKE KETESVDLES VIETQMICGL MEEVKKMQRE MLELKGFVKS
601: CVDFQKFKSA SGVQAFTSIL N

Best Arabidopsis Sequence Match ( AT5G44690.1 )
(BLAST)

001: MASRDGNKKK KNLKVFVRDR YNSFRVLPID DSGSNEDGKR KEVIECSSRS PVFETGESLQ IPSSYPLETN SNPFYIPGQP ETSSRNGVSM GASSLVQIWE
101: ARSQQSSSSL SQSLLDSRTS SESSLSDFLN DEARKSNESS GEEIDWFPQS DMNNVSNSYE NDGEGRCFLE LASCSTPRIR GRQASEDVCK MILRDRENEL
201: ELLGGRYAVS KFSPRGCGRL QYMLMIRSLE RCIVIQERYR SKSDVNRFSR GSRNRYMANT KKGFRSNLNS AVETKNLSGV VYFRVKSVLQ ETMEKSNTRE
301: NQAAADKPEI ANKPVFNDAA SNENGSKKPE IERKATEEGE GLRKVTVKEG EETNKFSSSF VEKVYLWDSK ERANRRRTMG KAKDEGKDAR RVIDVKTEGR
401: NEERRKKEEG KSMEIEEYRS NPQEVTSVVC LDREKDEETA RQVFRESGKE EKSSQNDEET SKAEKQQAAE TLFLILESPI FLNAWDENET ENEENEDCNR
501: EIMYYDWISD ISRPRSYWED LKKQRVLEVM NNISEKGDMW NLIKWRTVSS FLEGDFREKI DKIMISCVQK RSEIGSNLVE EEEGNEETLV ECSERYQGNV
601: EENETKKLIL EPETETQMIC DLKQQIKQLQ RDILELQSLV KSCVDFQKSL EFESLSGTNV CL

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu /.../es - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G44690]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.