Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14941 | Canola | nucleus | 23.87 | 25.44 |
| CDX96975 | Canola | cytosol | 20.54 | 19.8 |
| AT2G34920.2 | Thale cress | nucleus | 19.34 | 19.22 |
| AT1G30860.1 | Thale cress | cytosol | 17.98 | 16.3 |
| GSMUA_Achr4P33210_001 | Banana | nucleus | 11.93 | 14.55 |
| VIT_01s0010g00340.t01 | Wine grape | nucleus | 16.01 | 14.54 |
| KRH37161 | Soybean | nucleus | 19.64 | 14.1 |
| AT4G20160.2 | Thale cress | cytosol | 24.77 | 13.52 |
| KRH12155 | Soybean | nucleus | 18.58 | 13.41 |
| Solyc10g005220.2.1 | Tomato | nucleus, plastid | 17.98 | 12.63 |
| PGSC0003DMT400029374 | Potato | nucleus, plastid | 16.92 | 11.36 |
| HORVU2Hr1G048520.1 | Barley | plastid | 10.73 | 11.04 |
| GSMUA_Achr7P00390_001 | Banana | nucleus | 11.63 | 10.59 |
| PGSC0003DMT400035458 | Potato | nucleus | 16.01 | 10.24 |
| Solyc02g082100.2.1 | Tomato | vacuole | 15.86 | 9.74 |
| EER99396 | Sorghum | plastid | 11.33 | 9.72 |
| Os07t0499800-01 | Rice | nucleus | 11.03 | 9.71 |
| TraesCS2A01G229600.2 | Wheat | nucleus, plastid | 10.73 | 9.61 |
| Zm00001d021532_P001 | Maize | cytosol, plastid | 11.03 | 9.44 |
| TraesCS2B01G251300.1 | Wheat | nucleus, plastid | 10.27 | 9.26 |
| TraesCS2D01G233500.1 | Wheat | cytosol, plastid | 10.57 | 9.25 |
| Zm00001d006417_P002 | Maize | plastid | 7.25 | 8.18 |
| AT2G27950.2 | Thale cress | nucleus | 7.85 | 6.2 |
| AT5G04460.1 | Thale cress | nucleus | 8.01 | 6.14 |
| Os03t0107500-00 | Rice | plasma membrane | 1.36 | 2.47 |
Protein Annotations
| ArrayExpress:AT5G44690 | EnsemblPlants:AT5G44690.1 | EnsemblPlantsGene:AT5G44690 | EntrezGene:834498 | GO:GO:0008150 | PANTHER:PTHR10044 |
| PANTHER:PTHR10044:SF103 | ProteinID:AED95147.1 | RefSeq:AT5G44690 | RefSeq:AT5G44690-TAIR-G | RefSeq:NP_199282.2 | SEG:seg |
| TAIR:AT5G44690 | TAIR:AT5G44690.1 | Unigene:At.55362 | UniParc:UPI000173958C | UniProt:F4KAC4 | MapMan:35.2 |
Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu /.../es - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G44690]
Coordinates
chr5:-:18029338..18032293
Molecular Weight (calculated)
76114.6 Da
IEP (calculated)
4.819
GRAVY (calculated)
-0.967
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRDGNKKK KNLKVFVRDR YNSFRVLPID DSGSNEDGKR KEVIECSSRS PVFETGESLQ IPSSYPLETN SNPFYIPGQP ETSSRNGVSM GASSLVQIWE
101: ARSQQSSSSL SQSLLDSRTS SESSLSDFLN DEARKSNESS GEEIDWFPQS DMNNVSNSYE NDGEGRCFLE LASCSTPRIR GRQASEDVCK MILRDRENEL
201: ELLGGRYAVS KFSPRGCGRL QYMLMIRSLE RCIVIQERYR SKSDVNRFSR GSRNRYMANT KKGFRSNLNS AVETKNLSGV VYFRVKSVLQ ETMEKSNTRE
301: NQAAADKPEI ANKPVFNDAA SNENGSKKPE IERKATEEGE GLRKVTVKEG EETNKFSSSF VEKVYLWDSK ERANRRRTMG KAKDEGKDAR RVIDVKTEGR
401: NEERRKKEEG KSMEIEEYRS NPQEVTSVVC LDREKDEETA RQVFRESGKE EKSSQNDEET SKAEKQQAAE TLFLILESPI FLNAWDENET ENEENEDCNR
501: EIMYYDWISD ISRPRSYWED LKKQRVLEVM NNISEKGDMW NLIKWRTVSS FLEGDFREKI DKIMISCVQK RSEIGSNLVE EEEGNEETLV ECSERYQGNV
601: EENETKKLIL EPETETQMIC DLKQQIKQLQ RDILELQSLV KSCVDFQKSL EFESLSGTNV CL
101: ARSQQSSSSL SQSLLDSRTS SESSLSDFLN DEARKSNESS GEEIDWFPQS DMNNVSNSYE NDGEGRCFLE LASCSTPRIR GRQASEDVCK MILRDRENEL
201: ELLGGRYAVS KFSPRGCGRL QYMLMIRSLE RCIVIQERYR SKSDVNRFSR GSRNRYMANT KKGFRSNLNS AVETKNLSGV VYFRVKSVLQ ETMEKSNTRE
301: NQAAADKPEI ANKPVFNDAA SNENGSKKPE IERKATEEGE GLRKVTVKEG EETNKFSSSF VEKVYLWDSK ERANRRRTMG KAKDEGKDAR RVIDVKTEGR
401: NEERRKKEEG KSMEIEEYRS NPQEVTSVVC LDREKDEETA RQVFRESGKE EKSSQNDEET SKAEKQQAAE TLFLILESPI FLNAWDENET ENEENEDCNR
501: EIMYYDWISD ISRPRSYWED LKKQRVLEVM NNISEKGDMW NLIKWRTVSS FLEGDFREKI DKIMISCVQK RSEIGSNLVE EEEGNEETLV ECSERYQGNV
601: EENETKKLIL EPETETQMIC DLKQQIKQLQ RDILELQSLV KSCVDFQKSL EFESLSGTNV CL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.