Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14941 | Canola | nucleus | 38.14 | 42.19 |
| CDY31650 | Canola | nucleus, plastid | 21.69 | 23.14 |
| CDY52188 | Canola | nucleus | 22.13 | 22.19 |
| CDY12454 | Canola | nucleus | 20.67 | 22.02 |
| CDX84276 | Canola | endoplasmic reticulum, extracellular | 21.25 | 21.57 |
| CDY02344 | Canola | cytosol | 21.11 | 21.08 |
| AT5G44690.1 | Thale cress | nucleus | 19.8 | 20.54 |
| VIT_01s0010g00340.t01 | Wine grape | nucleus | 20.67 | 19.48 |
| GSMUA_Achr4P33210_001 | Banana | nucleus | 15.28 | 19.34 |
| CDY09519 | Canola | nucleus | 20.09 | 19.25 |
| CDX78978 | Canola | cytosol | 26.35 | 15.99 |
| HORVU2Hr1G048520.1 | Barley | plastid | 14.7 | 15.71 |
| CDY50063 | Canola | cytosol | 25.04 | 15.65 |
| KRH37161 | Soybean | nucleus | 20.96 | 15.62 |
| TraesCS2B01G251300.1 | Wheat | nucleus, plastid | 16.16 | 15.12 |
| KRH12155 | Soybean | nucleus | 19.94 | 14.94 |
| TraesCS2D01G233500.1 | Wheat | cytosol, plastid | 16.3 | 14.8 |
| EER99396 | Sorghum | plastid | 16.3 | 14.51 |
| Zm00001d006417_P002 | Maize | plastid | 12.23 | 14.31 |
| Zm00001d021532_P001 | Maize | cytosol, plastid | 16.01 | 14.23 |
| TraesCS2A01G229600.2 | Wheat | nucleus, plastid | 15.28 | 14.21 |
| GSMUA_Achr7P00390_001 | Banana | nucleus | 14.99 | 14.17 |
| Solyc10g005220.2.1 | Tomato | nucleus, plastid | 19.36 | 14.12 |
| Os07t0499800-01 | Rice | nucleus | 15.43 | 14.1 |
| PGSC0003DMT400029374 | Potato | nucleus, plastid | 20.09 | 14.0 |
| PGSC0003DMT400035458 | Potato | nucleus | 18.92 | 12.56 |
| Solyc02g082100.2.1 | Tomato | vacuole | 18.92 | 12.06 |
| CDY00948 | Canola | cytosol | 7.86 | 7.49 |
| CDY41355 | Canola | nucleus | 8.01 | 7.3 |
| CDY08599 | Canola | nucleus | 7.57 | 7.19 |
| CDY04520 | Canola | cytosol, plastid | 6.7 | 6.78 |
| CDX70223 | Canola | cytosol | 7.42 | 6.58 |
| CDY44857 | Canola | nucleus | 6.84 | 6.05 |
| Os03t0107500-00 | Rice | plasma membrane | 1.75 | 3.29 |
| CDX71406 | Canola | cytosol | 2.47 | 3.04 |
Protein Annotations
| EnsemblPlants:CDX96975 | EnsemblPlantsGene:GSBRNA2T00103915001 | Gene3D:3.30.40.10 | GO:A0A078E4K2 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR10044 | PANTHER:PTHR10044:SF103 | PFAM:PF13920 |
| PFscan:PS50089 | ProteinID:CDX96975 | ProteinID:CDX96975.1 | SEG:seg | SUPFAM:SSF57850 | UniParc:UPI0004EBA979 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC02g31130D
Coordinates
chrLK031896:-:1295021..1298417
Molecular Weight (calculated)
78505.3 Da
IEP (calculated)
5.217
GRAVY (calculated)
-0.743
Length
687 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLEMVSTK MFECVPSDRS KKEKDLKVLV RDQSDSFHVV PGDDSGNKQD GNEVLECSSR TSVSDTEEAQ QNISSPETNS NPFYNLVETG NSSRNEIIVG
101: ASSLVQIWEA RSRPSSPTRN HFFIDSLFFE SLNEEARNNS EEVDWCLQSN ISDSCEKERE SRCSPPLVRI RGRQAFEDFL MVILRERKKY LKWIAGLTAV
201: SKFSPRGCER LQYMLRIRSF ERCIAIQERH LFKSAKRSSR GSGVMNNLRY KKNTGQPKIA NEAVLSEDTS NKNGLKKHEI ERKSTEEGEG SGETTEKGIV
301: MGSVETNNTL SITEKVNLWD SKERSNMRIT MGKAKKEGKA ARSGIDVEVT EVINIETDGY RVNPQDVTSM ISLEKRKEEE NASSVSRESH TDEMFSKDVE
401: ETSKDKKQEA SETLCPILES PRFLNGWVEN DMEGEDEYKD YSGDSVNYDW VSHISRPRSY WDDLRKEREL EIIKRHSKND DIFQKLIKEK TVFSFLTSDF
501: RKEIEKILIS RPQKGLEVKG NHVDGEASEE CSAEYQEKLK EKETESVDLE SVIVCDGFSQ DSAKSTMKTW IFEDHEPYLK DHENTSSETQ MICGLMEEVK
601: KMQREMVELK GFVKSCVYFQ KFKSASVSDS LQGNCSVCFE KPIDSLLYRC GHMCTCLKCG HELLWSTKKC PICMAPIIDV VRAFLDS
101: ASSLVQIWEA RSRPSSPTRN HFFIDSLFFE SLNEEARNNS EEVDWCLQSN ISDSCEKERE SRCSPPLVRI RGRQAFEDFL MVILRERKKY LKWIAGLTAV
201: SKFSPRGCER LQYMLRIRSF ERCIAIQERH LFKSAKRSSR GSGVMNNLRY KKNTGQPKIA NEAVLSEDTS NKNGLKKHEI ERKSTEEGEG SGETTEKGIV
301: MGSVETNNTL SITEKVNLWD SKERSNMRIT MGKAKKEGKA ARSGIDVEVT EVINIETDGY RVNPQDVTSM ISLEKRKEEE NASSVSRESH TDEMFSKDVE
401: ETSKDKKQEA SETLCPILES PRFLNGWVEN DMEGEDEYKD YSGDSVNYDW VSHISRPRSY WDDLRKEREL EIIKRHSKND DIFQKLIKEK TVFSFLTSDF
501: RKEIEKILIS RPQKGLEVKG NHVDGEASEE CSAEYQEKLK EKETESVDLE SVIVCDGFSQ DSAKSTMKTW IFEDHEPYLK DHENTSSETQ MICGLMEEVK
601: KMQREMVELK GFVKSCVYFQ KFKSASVSDS LQGNCSVCFE KPIDSLLYRC GHMCTCLKCG HELLWSTKKC PICMAPIIDV VRAFLDS
001: MASRDGNKKK KNLKVFVRDR YNSFRVLPID DSGSNEDGKR KEVIECSSRS PVFETGESLQ IPSSYPLETN SNPFYIPGQP ETSSRNGVSM GASSLVQIWE
101: ARSQQSSSSL SQSLLDSRTS SESSLSDFLN DEARKSNESS GEEIDWFPQS DMNNVSNSYE NDGEGRCFLE LASCSTPRIR GRQASEDVCK MILRDRENEL
201: ELLGGRYAVS KFSPRGCGRL QYMLMIRSLE RCIVIQERYR SKSDVNRFSR GSRNRYMANT KKGFRSNLNS AVETKNLSGV VYFRVKSVLQ ETMEKSNTRE
301: NQAAADKPEI ANKPVFNDAA SNENGSKKPE IERKATEEGE GLRKVTVKEG EETNKFSSSF VEKVYLWDSK ERANRRRTMG KAKDEGKDAR RVIDVKTEGR
401: NEERRKKEEG KSMEIEEYRS NPQEVTSVVC LDREKDEETA RQVFRESGKE EKSSQNDEET SKAEKQQAAE TLFLILESPI FLNAWDENET ENEENEDCNR
501: EIMYYDWISD ISRPRSYWED LKKQRVLEVM NNISEKGDMW NLIKWRTVSS FLEGDFREKI DKIMISCVQK RSEIGSNLVE EEEGNEETLV ECSERYQGNV
601: EENETKKLIL EPETETQMIC DLKQQIKQLQ RDILELQSLV KSCVDFQKSL EFESLSGTNV CL
101: ARSQQSSSSL SQSLLDSRTS SESSLSDFLN DEARKSNESS GEEIDWFPQS DMNNVSNSYE NDGEGRCFLE LASCSTPRIR GRQASEDVCK MILRDRENEL
201: ELLGGRYAVS KFSPRGCGRL QYMLMIRSLE RCIVIQERYR SKSDVNRFSR GSRNRYMANT KKGFRSNLNS AVETKNLSGV VYFRVKSVLQ ETMEKSNTRE
301: NQAAADKPEI ANKPVFNDAA SNENGSKKPE IERKATEEGE GLRKVTVKEG EETNKFSSSF VEKVYLWDSK ERANRRRTMG KAKDEGKDAR RVIDVKTEGR
401: NEERRKKEEG KSMEIEEYRS NPQEVTSVVC LDREKDEETA RQVFRESGKE EKSSQNDEET SKAEKQQAAE TLFLILESPI FLNAWDENET ENEENEDCNR
501: EIMYYDWISD ISRPRSYWED LKKQRVLEVM NNISEKGDMW NLIKWRTVSS FLEGDFREKI DKIMISCVQK RSEIGSNLVE EEEGNEETLV ECSERYQGNV
601: EENETKKLIL EPETETQMIC DLKQQIKQLQ RDILELQSLV KSCVDFQKSL EFESLSGTNV CL
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu /.../es - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G44690]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.