Factsheet for Solyc07g032490.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 3
peroxisome 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075163	Potato	plasma membrane	95.78	93.97
Solyc01g096880.2.1	Tomato	plasma membrane	78.38	77.7
VIT_11s0016g05170.t01	Wine grape	plasma membrane	76.8	75.87
AT2G26690.1	Thale cress	plasma membrane	75.57	74.52
KRH20280	Soybean	plasma membrane	75.92	74.35
KRH03705	Soybean	plasma membrane	76.1	74.02
Bra012052.1-P	Field mustard	plasma membrane	67.14	73.32
CDY45207	Canola	golgi, plasma membrane	75.57	73.25
CDX71495	Canola	plasma membrane	76.1	72.17
CDY30787	Canola	mitochondrion	75.04	71.05
GSMUA_Achr6P05170_001	Banana	plasma membrane	70.12	68.91
TraesCS1B01G038700.1	Wheat	peroxisome	67.31	65.81
HORVU1Hr1G004720.4	Barley	plasma membrane	66.43	65.51
TraesCS1D01G032700.1	Wheat	peroxisome	66.96	65.46
TraesCS1A01G031300.1	Wheat	peroxisome	66.78	65.29
Solyc08g061020.1.1	Tomato	plasma membrane	33.22	63.0
KXG32694	Sorghum	cytosol	64.85	62.86
GSMUA_Achr7P08300_001	Banana	plasma membrane	73.81	62.41
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	64.5	62.1
Solyc08g061010.2.1	Tomato	plasma membrane	28.65	61.28
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	63.09	60.74
GSMUA_Achr4P30700_001	Banana	plasma membrane	72.58	60.12
Solyc08g078950.2.1	Tomato	cytosol, peroxisome, plasma membrane	56.24	54.24
Solyc08g007430.1.1	Tomato	cytosol, peroxisome, plasma membrane	54.13	52.2
Solyc06g060620.2.1	Tomato	plasma membrane	53.78	51.69
Solyc07g049290.2.1	Tomato	nucleus	50.79	48.9
Solyc12g006050.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.44	48.48
Solyc04g079510.1.1	Tomato	plasma membrane	37.79	37.65
Solyc04g079520.2.1	Tomato	plasma membrane	38.31	37.46
Solyc01g103030.2.1	Tomato	cytosol, peroxisome, plasma membrane	39.19	36.8
Solyc05g007000.2.1	Tomato	plasma membrane	36.56	36.62
Solyc04g079530.2.1	Tomato	plasma membrane	37.26	36.61
Solyc05g006990.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	37.26	36.18
Solyc03g005950.1.1	Tomato	plasma membrane	39.54	35.89
Solyc11g042820.1.1	Tomato	peroxisome, plasma membrane, vacuole	36.91	35.41
Solyc04g005790.2.1	Tomato	plasma membrane	36.03	35.28
Solyc10g039290.1.1	Tomato	plasma membrane	33.04	32.87
Solyc01g102360.1.1	Tomato	plasma membrane	34.09	31.86
Solyc03g113250.2.1	Tomato	plasma membrane	32.51	30.33

Protein Annotations

MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006857
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:K4CDJ0
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF85
InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc07g032490.2	EnsemblPlants:Solyc07g032490.2.1	TMHMM:TMhelix	UniParc:UPI000276B215
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:39519551..39522061

Molecular Weight (calculated)

62644.0 Da

IEP (calculated)

9.723

GRAVY (calculated)

0.370

Length

569 amino acids

Sequence
(BLAST)

001: MSLDAVDYKG FPADKSKTGG WVPATLILGI EIVERLSTMG IAVNLVTYLG GTMHLASSNS ANIVTDFMGT SFLLCLLGGF LADSFLGRYK TIALFALIQT
101: LGTGMLTVAT TLPQLRPPPC NLNCQPANGF QMGILYLALY LIALGTGGLK SSVSVFGTDQ FDEKDDKEKA QMTYFFNRFF FFISLGTLTA VTVLVYIQDE
201: VGRIWAYGVC SLSMFIAIII FLLGSKRYRY KKSAGSPIVH IFQVIVAAIR KRKLDLPYDA AMLYESTSTP EASRIQHTQE FRILDKAAIV TEGDFEEHAS
301: CSAPNPWKLS SVTRVEEVKM MAKLLPIWAT TIIFWTTYAQ MITFSVEQAS TMERTIGNFQ IPAGSLTVFF VAAILITLAL YDRIIMPLWK KWKGKPGFTN
401: LQRIAIGLVL SVIGMAAAAL AEQKRLTVAK SAGRNTSTLP ISVFLLIPQF FFVGAGEAFI YTGQLDFFIT QSPKGMKTMS TGLFLTTLSL GFFISSFLVS
501: VIKKATKTNA TAQGWLADNI NYGRLDLFYW LLAALGVINF AIYLNSATWY KPRKPKSPIP NGYGAQDKC

Best Arabidopsis Sequence Match ( AT2G26690.1 )
(BLAST)

001: MESKGSWTVA DAVDYKGRPA DKSKTGGWIT AALILGIEVV ERLSTMGIAV NLVTYLMETM HLPSSTSANI VTDFMGTSFL LCLLGGFLAD SFLGRFKTIG
101: IFSTIQALGT GALAVATKLP ELRPPTCHHG EACIPATAFQ MTILYVSLYL IALGTGGLKS SISGFGSDQF DDKDPKEKAH MAFFFNRFFF FISMGTLLAV
201: TVLVYMQDEV GRSWAYGICT VSMAIAIVIF LCGTKRYRYK KSQGSPVVQI FQVIAAAFRK RKMELPQSIV YLYEDNPEGI RIEHTDQFHL LDKAAIVAEG
301: DFEQTLDGVA IPNPWKLSSV TKVEEVKMMV RLLPIWATTI IFWTTYAQMI TFSVEQASTM RRNIGSFKIP AGSLTVFFVA AILITLAVYD RAIMPFWKKW
401: KGKPGFSSLQ RIAIGLVLST AGMAAAALVE QKRLSVAKSS SQKTLPISVF LLVPQFFLVG AGEAFIYTGQ LDFFITQSPK GMKTMSTGLF LTTLSLGFFV
501: SSFLVSIVKR VTSTSTDVGW LADNINHGRL DYFYWLLVIL SGINFVVYII CALWFKPTKG KDSVEKENGK GFSVEDC

Arabidopsis Description

NPF6.2Protein NRT1/ PTR FAMILY 6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.