Factsheet for Solyc08g061010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 3
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g096880.2.1	Tomato	plasma membrane	62.41	28.92
Solyc07g032490.2.1	Tomato	plasma membrane	61.28	28.65
GSMUA_Achr6P05170_001	Banana	plasma membrane	59.02	27.12
TraesCS1D01G032700.1	Wheat	peroxisome	57.52	26.29
TraesCS1B01G038700.1	Wheat	peroxisome	57.52	26.29
TraesCS1A01G031300.1	Wheat	peroxisome	56.77	25.95
HORVU1Hr1G004720.4	Barley	plasma membrane	55.64	25.65
Zm00001d044529_P001	Maize	cytosol, peroxisome, plasma membrane	56.02	25.21
KXG32694	Sorghum	cytosol	54.89	24.87
Zm00001d009399_P001	Maize	cytosol, peroxisome, plasma membrane	54.51	24.53
GSMUA_Achr7P08300_001	Banana	plasma membrane	60.9	24.07
GSMUA_Achr4P30700_001	Banana	plasma membrane	58.65	22.71
Solyc08g007430.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.0	22.54
Solyc08g078950.2.1	Tomato	cytosol, peroxisome, plasma membrane	48.12	21.69
Solyc06g060620.2.1	Tomato	plasma membrane	48.12	21.62
Solyc12g006050.1.1	Tomato	cytosol, peroxisome, plasma membrane	43.23	19.43
Solyc07g049290.2.1	Tomato	nucleus	42.11	18.95
Solyc04g079510.1.1	Tomato	plasma membrane	38.35	17.86
Solyc01g103030.2.1	Tomato	cytosol, peroxisome, plasma membrane	37.22	16.34
Solyc04g079520.2.1	Tomato	plasma membrane	35.71	16.32
Solyc03g005950.1.1	Tomato	plasma membrane	37.97	16.11
Solyc10g039290.1.1	Tomato	plasma membrane	34.59	16.08
Solyc05g007000.2.1	Tomato	plasma membrane	33.46	15.67
Solyc11g042820.1.1	Tomato	peroxisome, plasma membrane, vacuole	34.59	15.51
Solyc01g102360.1.1	Tomato	plasma membrane	35.34	15.44
Solyc04g079530.2.1	Tomato	plasma membrane	33.46	15.37
Solyc05g006990.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	33.83	15.36
Solyc04g005790.2.1	Tomato	plasma membrane	33.08	15.15
Solyc03g113250.2.1	Tomato	plasma membrane	26.32	11.48
Solyc08g061020.1.1	Tomato	plasma membrane	3.38	3.0

Protein Annotations

EnsemblPlants:Solyc08g061010.2.1	EnsemblPlantsGene:Solyc08g061010.2	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF85	PFAM:PF00854	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI000276CA80	UniProt:K4CKP4	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr8:-:46387674..46388979

Molecular Weight (calculated)

29526.6 Da

IEP (calculated)

8.454

GRAVY (calculated)

0.611

Length

266 amino acids

Sequence
(BLAST)

001: MTKEDYECIN SLAENPWRIS SVTKVEEVKM IIRLLPIWTT SILFWTAYAQ LVTFSVEQAS TMDRSIGDFR IPAASLTAFF VSAILISLAT YDRLILPFLK
101: IWTAKKSGLT SLQKIGIGLF LSCLGMGVAS IIEVKRLSIA KENEETPNTL PISVFLLIPQ FFLVGAGVGF MYTGQLDLFI TQSPKGMKTM STGLFLTTMA
201: LGFFFSSLLI SIVKKVTTAN INNGWVGESI NKGRLDCFYG LLAILIFIDF GFYVLCASWY TSNIIC

Best Arabidopsis Sequence Match ( AT1G12110.1 )
(BLAST)

001: MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL
101: TIAIFAAIQA TGVSILTLST IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP KERSKMTYFF NRFFFCINVG
201: SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE
301: QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD
401: RVAIRLCKKL FNYPHGLRPL QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY TGQLDFFLRE CPKGMKGMST
501: GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH

Arabidopsis Description

NPF6.3NRT1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.