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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88364 Canola plasma membrane 99.58 99.58
Bra015673.1-P Field mustard plasma membrane 98.74 98.74
CDX87522 Canola plasma membrane 98.53 98.53
AT1G77380.1 Thale cress plasma membrane 92.23 92.23
Solyc06g060110.2.1 Tomato plasma membrane 75.84 76.65
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 77.31 76.51
PGSC0003DMT400030727 Potato plasma membrane 75.42 75.9
GSMUA_AchrUn_... Banana cytosol, plasma membrane, vacuole 64.08 73.85
KRH53283 Soybean golgi, peroxisome, plasma membrane 75.42 73.72
PGSC0003DMT400015426 Potato plasma membrane 73.95 73.49
KRH64623 Soybean cytosol, peroxisome, plasma membrane 74.37 72.69
KRH16402 Soybean plasma membrane 73.11 72.65
KRH17988 Soybean plasma membrane 73.11 72.65
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 68.07 72.48
GSMUA_Achr10P... Banana plasma membrane 63.45 72.42
CDY36017 Canola plasma membrane 73.11 72.35
CDY43761 Canola plasma membrane 70.8 72.32
CDX69918 Canola plasma membrane 73.53 72.16
GSMUA_Achr2P20670_001 Banana plasma membrane 66.81 72.11
CDY31348 Canola plasma membrane 70.59 72.1
CDX78353 Canola plasma membrane 73.74 72.07
CDY60629 Canola plasma membrane 62.6 71.81
CDY21569 Canola plasma membrane 73.11 71.75
CDY39844 Canola plasma membrane 70.17 71.67
GSMUA_Achr1P28270_001 Banana peroxisome, plasma membrane, vacuole 65.76 71.46
CDX84450 Canola plasma membrane 69.96 71.46
CDX81121 Canola plasma membrane 73.11 71.46
Solyc11g005070.1.1 Tomato plasma membrane 71.43 71.43
PGSC0003DMT400043280 Potato plasma membrane 69.75 70.94
TraesCS3A01G406800.1 Wheat plasma membrane 69.33 70.66
Zm00001d010231_P001 Maize plasma membrane 70.8 70.5
CDY43854 Canola plasma membrane 72.06 70.43
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 71.64 70.31
Os11t0195600-01 Rice cytosol, plasma membrane, vacuole 69.96 69.96
TraesCS1A01G264500.1 Wheat golgi, peroxisome, plasma membrane 72.06 69.86
TraesCS1D01G264700.1 Wheat golgi, peroxisome, vacuole 71.64 69.59
CDY47793 Canola plasma membrane 69.54 69.54
HORVU3Hr1G091110.1 Barley cytosol, vacuole 17.23 69.49
Zm00001d053143_P002 Maize plasma membrane 68.7 69.28
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 70.59 69.28
CDY14972 Canola plasma membrane 69.12 69.12
TraesCS3A01G406900.1 Wheat plasma membrane 69.54 68.96
Zm00001d023603_P001 Maize plasma membrane 53.36 68.65
HORVU3Hr1G091120.3 Barley plasma membrane 69.12 68.54
TraesCS3A01G407000.1 Wheat plasma membrane 69.12 68.54
TraesCS3D01G402200.1 Wheat plasma membrane 69.33 68.46
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 71.01 68.42
Zm00001d023593_P001 Maize plasma membrane 68.49 68.34
TraesCS3B01G441100.1 Wheat plasma membrane 68.91 68.33
TraesCS3B01G441200.1 Wheat plasma membrane 68.91 68.33
Os12t0181500-01 Rice plasma membrane 68.07 68.21
Os12t0181600-01 Rice plasma membrane 68.07 68.21
TraesCS4D01G097400.1 Wheat plasma membrane 69.54 67.97
Os05t0424000-01 Rice cytosol, plasma membrane, vacuole 70.8 67.94
EES08162 Sorghum plasma membrane 68.49 67.78
EES16763 Sorghum plasma membrane 68.49 67.78
TraesCS4B01G100800.1 Wheat plasma membrane 69.33 67.76
TraesCS4A01G215300.1 Wheat plasma membrane 69.12 67.7
EES16764 Sorghum plasma membrane 68.49 67.63
HORVU4Hr1G043680.3 Barley plasma membrane 69.33 67.62
Os01t0882800-01 Rice plasma membrane 69.33 67.62
HORVU5Hr1G037660.1 Barley plasma membrane 67.86 67.43
EES16761 Sorghum plasma membrane 67.65 67.36
TraesCS5A01G115100.1 Wheat plasma membrane 67.65 67.22
TraesCS5D01G125700.1 Wheat plasma membrane 67.65 67.22
Zm00001d042619_P002 Maize plasma membrane 69.75 67.21
EES15765 Sorghum plasma membrane 67.44 67.01
TraesCS5B01G116100.1 Wheat plasma membrane 67.44 67.01
EES03989 Sorghum plasma membrane 69.12 67.01
TraesCS3D01G402300.1 Wheat plasma membrane 69.33 66.94
Zm00001d023596_P001 Maize cytosol, peroxisome, plasma membrane 67.65 66.81
CDY71454 Canola golgi, peroxisome, plasma membrane 39.29 66.79
PGSC0003DMT400008650 Potato plasma membrane 64.92 66.59
GSMUA_Achr8P08250_001 Banana cytosol, peroxisome, plasma membrane, plastid 69.54 66.33
Zm00001d023592_P001 Maize plasma membrane 66.39 65.83
GSMUA_Achr8P32600_001 Banana plasma membrane 73.95 64.35
EES08159 Sorghum cytosol, peroxisome, plasma membrane 65.55 64.2
KXG23123 Sorghum mitochondrion, plastid 67.02 63.55
Zm00001d004705_P001 Maize plasma membrane 59.87 62.78
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 69.75 62.52
HORVU3Hr1G091070.1 Barley cytosol 59.66 62.01
Zm00001d041842_P002 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 66.6 61.79
HORVU3Hr1G091020.2 Barley mitochondrion 68.91 61.77
TraesCS1B01G275200.1 Wheat mitochondrion 71.64 60.89
TraesCS5B01G120000.1 Wheat plasma membrane 59.45 60.08
TraesCS5A01G113300.1 Wheat cytosol, peroxisome, plasma membrane 59.03 59.28
TraesCS5D01G129000.1 Wheat cytosol, peroxisome, plasma membrane 56.93 58.79
HORVU2Hr1G084780.1 Barley extracellular 27.94 58.08
Zm00001d050211_P001 Maize peroxisome 55.25 57.93
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 58.4 57.68
EES13588 Sorghum cytosol, peroxisome, plasma membrane 59.24 56.63
CDY46779 Canola plasma membrane 56.93 56.58
CDY04349 Canola cytosol, peroxisome, plasma membrane 56.3 55.37
TraesCS2B01G367000.1 Wheat plasma membrane 57.56 55.35
CDY57931 Canola plasma membrane 53.99 55.15
CDY57932 Canola plasma membrane 53.36 54.98
CDY22609 Canola plasma membrane 55.46 54.89
CDY63746 Canola extracellular, plasma membrane 40.97 54.78
TraesCS3A01G065600.1 Wheat plasma membrane 52.73 54.57
CDY48843 Canola cytosol, peroxisome, plasma membrane 54.83 54.49
CDY53831 Canola plasma membrane 55.04 54.47
CDY53793 Canola cytosol, peroxisome, plasma membrane 54.62 54.28
CDY62728 Canola plasma membrane 54.83 54.15
CDY44564 Canola cytosol, peroxisome, plasma membrane 55.88 52.47
CDY62727 Canola cytosol, peroxisome, plasma membrane 51.68 52.45
TraesCS7D01G388300.1 Wheat plasma membrane 57.98 52.37
CDY60248 Canola cytosol, peroxisome, plasma membrane 55.67 52.27
TraesCS2D01G346500.1 Wheat plasma membrane 55.04 52.19
CDY22607 Canola plasma membrane 52.52 51.98
CDY49542 Canola plasma membrane 22.48 51.94
CDY22608 Canola plasma membrane 53.78 50.79
HORVU2Hr1G084710.1 Barley plasma membrane 39.71 50.67
CDY04448 Canola peroxisome 55.88 49.26
CDY16869 Canola plasma membrane 47.69 48.3
CDX87155 Canola plasma membrane 34.66 46.88
Os12t0195100-00 Rice plastid 43.91 42.14
TraesCS2D01G347000.2 Wheat cytosol, plasma membrane, vacuole 40.55 37.26
TraesCS2A01G348600.2 Wheat cytosol, plasma membrane, vacuole 39.5 36.58
CDY53832 Canola plasma membrane 52.73 23.81
Protein Annotations
EnsemblPlants:CDX88365EnsemblPlantsGene:GSBRNA2T00147888001GO:A0A078DGK3InterPro:AA_transpt_TMncoils:CoilPANTHER:PTHR22950
PANTHER:PTHR22950:SF456PFAM:PF01490ProteinID:CDX88365ProteinID:CDX88365.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EEA8F5MapMan:24.2.3.4.1::::
Description
BnaC06g38090D
Coordinates
chrLK031855:-:580716..583293
Molecular Weight (calculated)
52160.0 Da
IEP (calculated)
8.986
GRAVY (calculated)
0.479
Length
476 amino acids
Sequence
(BLAST)
001: MVQNQQEAFS VDMPRTGGSK CFDDDGRIKR TGSVWTASAH IITAVIGSGV LSLAWATAQL GWLAGPVVML LFSIVTYFTS TLLAACYRSG DPISGKRNYT
101: YMDAVRSNLG GVKVKLCGIV QYLNLFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQIIFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVANGKVKGS LTGISIGAVT ETQKIWRSFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV GVTTMFYMLC GCMGYAAFGD
301: MSPGNLLTGF GFYNPYWLLD IANAAVVVLL VGAYQVYCQP LFAFIERQAS TRFPDSDFIA KDIKIPIPGF KPFRLNFFRL IWRTVFVIIT TLISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIEQKKI PRWSTQWVCL QVFSSACLVV SIAAAAGSIA GVVLDLKSYK PFQSNY
Best Arabidopsis Sequence Match ( AT1G77380.1 )
(BLAST)
001: MVQNHQTVLA VDMPQTGGSK YLDDDGKNKR TGSVWTASAH IITAVIGSGV LSLAWATAQL GWLAGPVVML LFSAVTYFTS SLLAACYRSG DPISGKRNYT
101: YMDAVRSNLG GVKVTLCGIV QYLNIFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQILFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVVNGKVKGS LTGISIGAVT ETQKIWRTFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV SVTTMFYMLC GCMGYAAFGD
301: LSPGNLLTGF GFYNPYWLLD IANAAIVIHL IGAYQVYCQP LFAFIEKQAS IQFPDSEFIA KDIKIPIPGF KPLRLNVFRL IWRTVFVIIT TVISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIAQKKI PRWSTRWVCL QVFSLGCLVV SIAAAAGSIA GVLLDLKSYK PFRSEY
Arabidopsis Description
AAP3ATAAP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3U1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.