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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63850.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G100800.1 Wheat plasma membrane 97.95 98.15
TraesCS4D01G097400.1 Wheat plasma membrane 97.75 97.95
TraesCS4A01G215300.1 Wheat plasma membrane 97.34 97.74
Zm00001d053143_P002 Maize plasma membrane 81.35 84.11
EES08162 Sorghum plasma membrane 81.15 82.33
HORVU5Hr1G037660.1 Barley plasma membrane 79.71 81.21
EES08159 Sorghum cytosol, peroxisome, plasma membrane 77.05 77.37
Zm00001d004705_P001 Maize plasma membrane 71.31 76.65
HORVU3Hr1G091120.3 Barley plasma membrane 71.52 72.71
GSMUA_Achr10P... Banana plasma membrane 61.48 71.94
HORVU3Hr1G091110.1 Barley cytosol, vacuole 17.21 71.19
GSMUA_Achr2P20670_001 Banana plasma membrane 63.73 70.52
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 71.11 70.24
Solyc06g060110.2.1 Tomato plasma membrane 67.62 70.06
Bra015673.1-P Field mustard plasma membrane 68.24 69.96
PGSC0003DMT400030727 Potato plasma membrane 67.62 69.77
CDX87522 Canola plasma membrane 68.03 69.75
CDX88364 Canola plasma membrane 68.03 69.75
CDX88365 Canola plasma membrane 67.62 69.33
AT1G77380.1 Thale cress plasma membrane 67.42 69.12
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 68.24 68.66
AT5G63850.1 Thale cress plasma membrane 64.75 67.81
CDY43761 Canola plasma membrane 64.75 67.81
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 62.09 67.79
PGSC0003DMT400015426 Potato plasma membrane 66.39 67.64
CDY31348 Canola plasma membrane 64.55 67.6
Bra024241.1-P Field mustard plasma membrane 64.55 67.6
Bra029199.1-P Field mustard plasma membrane 64.34 67.38
Solyc11g005070.1.1 Tomato plasma membrane 65.57 67.23
CDX84450 Canola plasma membrane 64.14 67.17
CDY39844 Canola plasma membrane 64.14 67.17
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 65.98 66.94
CDX69918 Canola plasma membrane 66.19 66.6
CDY21569 Canola plasma membrane 65.98 66.39
Bra009371.1-P Field mustard plasma membrane 65.98 66.39
CDX78353 Canola plasma membrane 66.19 66.32
CDX81121 Canola plasma membrane 65.98 66.12
Bra006016.1-P Field mustard plasma membrane 65.98 66.12
KRH16402 Soybean plasma membrane 64.75 65.97
HORVU2Hr1G084780.1 Barley extracellular 30.94 65.94
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 66.6 65.92
HORVU3Hr1G091020.2 Barley mitochondrion 71.52 65.72
HORVU3Hr1G091070.1 Barley cytosol 61.68 65.72
VIT_10s0116g01380.t01 Wine grape plasma membrane 60.86 65.56
KRH17988 Soybean plasma membrane 64.14 65.34
PGSC0003DMT400043280 Potato plasma membrane 62.5 65.17
KRH53283 Soybean golgi, peroxisome, plasma membrane 64.96 65.09
CDY36017 Canola plasma membrane 63.73 64.66
CDY60629 Canola plasma membrane 54.92 64.58
Bra014020.1-P Field mustard plasma membrane 63.32 64.24
CDY43854 Canola plasma membrane 63.93 64.07
Bra032199.1-P Field mustard plasma membrane 63.93 64.07
KRH64623 Soybean cytosol, peroxisome, plasma membrane 63.93 64.07
AT1G44100.1 Thale cress plasma membrane 62.91 63.96
PGSC0003DMT400008650 Potato plasma membrane 59.43 62.5
CDY47793 Canola plasma membrane 60.86 62.4
CDY71454 Canola golgi, peroxisome, plasma membrane 35.66 62.14
CDY14972 Canola plasma membrane 60.04 61.55
Bra036939.1-P Field mustard plasma membrane 60.04 61.55
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 60.25 60.0
VIT_07s0031g02340.t01 Wine grape peroxisome 68.44 59.33
HORVU2Hr1G084710.1 Barley plasma membrane 45.29 59.25
HORVU7Hr1G088510.2 Barley plasma membrane 54.92 58.39
HORVU2Hr1G061190.4 Barley plasma membrane 56.76 57.11
HORVU7Hr1G038330.1 Barley plasma membrane 56.97 56.5
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 56.15 53.0
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 48.57 50.97
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 47.54 49.68
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 44.26 46.25
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 47.95 44.57
HORVU2Hr1G111140.3 Barley golgi 44.06 43.35
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 37.91 35.1
Protein Annotations
EnsemblPlants:HORVU4Hr1G043680.3EnsemblPlantsGene:HORVU4Hr1G043680GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF250PFAM:PF01490SEG:segTMHMM:TMhelixUniParc:UPI000B47AD13
UniProt:A0A287NW82MapMan:24.2.3.4.1::::
Description
No Description!
Coordinates
chrchr4H:-:348342556..348344517
Molecular Weight (calculated)
52758.3 Da
IEP (calculated)
8.502
GRAVY (calculated)
0.432
Length
488 amino acids
Sequence
(BLAST)
001: MEKKQASYGK GAARMAPMEV SVEAGNGRES DWLDDDGRPR RSGTVWTASA HIITAVIGSG VLSLAWAIAQ LGWAAGPAIM LLFALVIYYT STLLAECYRS
101: GDPETGKRHY TYMDAVRSYL PGTKVKLCGV IQYANLVGVA IGYTIAASIS MRAVRRADCF HYHDVRGRSG KDSCKSSSNP YMIVFGVVQI LFSQIPDFDQ
201: IWWLSIVAAV MSFTYSTIGL GLGIAQTVAN GGIQGSLTGL SVGPGVTSMQ KVWRSLQAFG NIAFAYSYSI ILIEIQQDTV KAPPPSEAKV MKKATGISVA
301: TTTVFYMLCG CMGYAAFGDA APDNLLTGFG FYEPFWLLDV ANAAIVVHLV GAYQVFCQPL FAFVEKWAAA RWPDSAFIAR ELRVGPLAIS VFRLTWRTAF
401: VCLTTVVSML LPFFGDVVGL LGAVAFWPLT VYFPVEMYIV QRGVPRGSTR WVCLQMLSAA CLVVSVAAAA GSIADVIGEL KEYRPFSG
Best Arabidopsis Sequence Match ( AT1G44100.1 )
(BLAST)
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.